Coregonus clupeaformis (lake whitefish): 121538342
Help
Entry
121538342 CDS
T08357
Name
(RefSeq) inositol 1,4,5-trisphosphate receptor type 3
KO
K04960
inositol 1,4,5-triphosphate receptor type 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04070
Phosphatidylinositol signaling system
cclu04114
Oocyte meiosis
cclu04210
Apoptosis
cclu04218
Cellular senescence
cclu04270
Vascular smooth muscle contraction
cclu04371
Apelin signaling pathway
cclu04540
Gap junction
cclu04621
NOD-like receptor signaling pathway
cclu04625
C-type lectin receptor signaling pathway
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121538342
04020 Calcium signaling pathway
121538342
04070 Phosphatidylinositol signaling system
121538342
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
121538342
04210 Apoptosis
121538342
04218 Cellular senescence
121538342
09144 Cellular community - eukaryotes
04540 Gap junction
121538342
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121538342
04625 C-type lectin receptor signaling pathway
121538342
09152 Endocrine system
04912 GnRH signaling pathway
121538342
09153 Circulatory system
04270 Vascular smooth muscle contraction
121538342
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121538342
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121538342
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121538342
Ion channels [BR:
cclu04040
]
Ligand-gated channels
IP3 receptor
121538342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ins145_P3_rec
RYDR_ITPR
MIR
RIH_assoc
Ion_trans
SopA
Motif
Other DBs
NCBI-GeneID:
121538342
NCBI-ProteinID:
XP_041702175
LinkDB
All DBs
Position
24:complement(29759934..29819973)
Genome browser
AA seq
2680 aa
AA seq
DB search
MSDSMSSFLHIGDIVSLYAEGSVNGFISTLGLVDDRCVVEPAAGDLDYPPKKFRDCLFKV
CPMNRYSAQKQFWKAKQAKHEKDKIADVVLLQKLQHASNLEQKQNETENKKVHGDVVKYG
TVIQLLHMKSNKYLTVNKRLPALLEKNAMRVTLDGTGNEGSWMFIQPFWKLRANGDNVVV
GDKVILNPVNAGQPLHASNYELSDHAGCKEVNSVNCNTSWKINLFMMFSDHKDEVLKGGD
VVRLFHAEQEKFLTCDEYKVKLHVFLRTTLRQSATSATSSNALWEVEVVHHDPCRGGAGH
WNSLYRFKHLATGNYLAAEENPGYKGDSVEIQTSVSEDTLDSRGKLKILGERIKYKLVAV
PHGNDIASLFELDPTTLQKTDSFVPRNSYVRLRHLCTNTWIQSTNVPIDIDEERPIRLML
GTCPTKEDKEAFAIVSVPVMEIRDLDFANDASFMLSTIVDRFNEGFISPNDRRFAIKLLE
DLVFFVVDTPNSGQVVLDVAMTKANRERQKLMREQNILKQIFGILKAPFKDKGTEGPLLR
LEELSDQKNSPYQYMFRLCYRVLRHSQEDYRKNQEHIAKQFGVMQSQIGYDILAEDTITA
LLHNNRKLLEKHITKTEVETFVSLVRKNREPRFLDYLSDLCVSNNMAIPVTQELICKCVL
DPRNQDILIKTERRVAKEIPSATEYMGMEEYADDDEVWLVWTDKTNEKQEKGIRQLAQEA
RQGNAHDENVLTYYRYQLKLYARMCLDRQYLAIDEISKQLDVELIFLCMMDETLPFDLRA
SFCRLMLHAHVDRDPQELVTPVKFARLWTEIPTSITIKDYDSNMDDSRDNKKNKFANTMV
FMEEYLNNVLNDDLPFADEEKNKLTYEVVSLARHLIYFGFYSFFELLRLTRTLLGIIDCI
PNPSLINPMFQDDGSGKNMKRSIHGVGQIMSTMVLSRKQSMFGGPGRSASNIEGQNRSKD
SIDKQDVTVMDTKLKILEILQFILNVRLDYRLSFLLSVFKKEFVDVYPMADADATTSMEQ
TATINLQHIGEQAEAMFGVGKGNSILEVDDEGGRMFLRVLIHLTMHDYPPLVSGALQLLF
KHFSQRQEVLHTFKQVQLLISGQDVDNYKLIKSDLDHLRTTVEKSELWVDKKSSSGGGEG
KKDKKDKKENVEMASEDATPKKEKSEKSNENYQKVKDILERLNKMCSSGVWKKQQRLLKN
MGAHKVMLDLLQVSYDQHDTKMQGIIKSTHLFLQKFCMGNLENQMLLHKNLSLFLNPGLM
EAETVQHIFSNNYQLCTEISENVLQHFIHCLATHGRHVQYLNFLHTIIKAEGKYVKKCQD
MIMTELTNAGEDVVVFYNDKASFSTMLELMAESREGVQENSPLRYHISLVELLSACAEGK
NVYTEIKCTSLLPLEDVVRVVTHEDCITEVKVAYVNFVNHCYVDTEVEMKEIYTSNHIWK
LFEDFTVDMARVCNKREKRLTDPILEKYIINVVFDTINAFFSSPFSENSTSLQTHHTIVT
QLLQSSMRLLDCPWLQQQHRGLVETCIRTLAMTAKCRSISLPLDLESQITTMLSSSAPNA
LSRSNPNYKSSTRSSRPSAPNNPWDYKNIIEKLQDIINTLEERLKPLVNAELSVLVDVLQ
QPELLFLEGTDARQRCESGGFISKLIQHTKALMSSEEKLCIKVLRTLQEMLIRTLDFDEK
GIALRKVLLQNYLFTNKKNNKGDLVEHGATGAEQERDWAAVVAVQCRLDREGGTKLFTDL
VMSTKNDKIFQESIQLAICLLEGGNTEIQNSFYKLMMGDNKSEKFFKVLHDRMKNAQMDI
KANVSVSVGEMSNKANDNKDLDTSSGGLVLPATTLPLLAPSIGQVPVTALASEPEQKEVE
TEMGPAIIIMKPILRFLQLLCENHNQDLQNFLRCQNNKTNYNLVCETLQFLDIMCGSTTG
GLGLLGLYINESNVGLITQTLETLTEYCQGPCQENQTCIVTHESNGIDIITALILNDISP
LCRYRMEMVLQLKDNASKLLLALMESRHDSENAERILFNLRPRELVKVIKKAYQQESECE
GGEVSPQEVGHNIYILALQLARHNKILLNLLKPAKRTKEGEEGISSMLNLNNRPLSQMLK
STVPVESEEQDPLEFYDQHTSQIEIVREDRSMEQIVFPIHPICEFLTEESKFRVFNTTEQ
DEQGSKVTHFFQQASFLHNEMEWQKKLRSMPVLFWFSRRMSTWGSISFNLAVFINLIIAF
FYPYDSGQGAIDDSMLSMLFWGFLGLSVMGMFSKRYGLRPFTVALILRSIYCFGIGPTLI
LLGTLNLINKIVFVVSFVGNNGTFIMGYRAMVMDVEFLYHLAYVLTSTLGLCVHELFYSF
LLFDLIYREETLFNVIKSVTRNGRSILLTALLALILVYLFSIVGFLCLKNDFIMEVDPLP
QIDSGGHGNEKASQDFLNSCSGDGVSCTAEAGLPAEPDEENNSERACDTLLMCIVTVLNH
GLRNGGGVGDVLRKPSKNEPLFPARVIYDLLFYFIVIIIVLNLIFGVIIDTFADLRSEKQ
KKEEVLKTTCFICGLERDKFDNKTVSFEEHIKLEHNIWNYLYFIVLVREKNKTDYTGPES
YVALMIKSKNLDWFPRMQAMSLVVTDGDGEQNEMRNLQDRLTSTMNVVSQLTGQLTELKE
QMTEQRKRRQRMGFVESGGAGAASISPSAAGGNHQMYNKP
NT seq
8043 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcaatgtccagctttttgcacattggggacatcgtttccctttacgcagag
ggctctgtcaatggttttataagtacacttgggttggtggatgaccgatgtgtggtagaa
ccagctgcaggggacctggactatccccccaagaagttcagagactgcctcttcaaagtg
tgtcccatgaaccgctactctgcacagaaacagttctggaaagccaagcaggccaagcac
gagaaggacaagatcgctgatgttgtgctacttcagaaactacagcatgcttctaacctg
gaacagaaacagaatgagacagaaaacaagaaagtccacggagatgtagtaaaatatggc
actgtcattcagctcctgcatatgaagagtaataaatacctgactgtgaataagcgtctg
cctgccctgctggagaagaatgccatgcgggtcaccctggacgggacggggaatgagggc
tcctggatgttcatccaacccttctggaagctaagggccaacggagacaatgtagtggta
ggagataaagttatcctgaatccagtgaatgcaggccagcctctacatgccagtaactat
gagctctccgaccacgctggatgcaaagaggttaactctgtgaactgcaatactagctgg
aaaatcaacctgttcatgatgttcagtgaccacaaggatgaagtcttgaaaggaggggat
gtagtgcggttgttccatgcggagcaggagaagttcctgacctgtgatgagtacaaggtc
aagctgcatgtgttcctccgaaccaccctgcgccagtctgctacctctgccaccagctcc
aatgccctgtgggaagtggaggtggtgcatcatgatccatgtcgaggaggggctggacat
tggaacagtctgtatcgctttaaacaccttgccacagggaactatcttgcagctgaggaa
aatccgggttataaaggtgacagcgttgaaatccagacttcggtgagtgaagatacgctg
gacagtagaggaaaactaaagattttgggtgagaggataaagtacaagctggtggctgtg
cctcatgggaatgacattgcctccttgtttgagctagaccccaccactctgcagaaaaca
gactcctttgtgccaaggaattcatatgtgcgcctcagacacctatgcaccaacacatgg
atccagagtaccaacgtgcccatagatatcgatgaggagagaccaatccggctcatgctg
ggcacctgccctaccaaggaggataaggaggcctttgccatcgtgtcagtgccagtgatg
gagatccgggacctggactttgccaatgatgccagtttcatgttgagcaccatagtggac
aggttcaatgagggctttatcagtcccaatgacagaaggtttgccattaagctgctggag
gacctggtgttcttcgtggtggacacgcccaacagtggccaggttgtgctggatgtggcg
atgaccaaggccaaccgcgagagacagaaactcatgagggagcaaaacatcctcaaacag
atctttgggatcctgaaggcccctttcaaagataaagggacagagggcccattgctgcga
ttggaggagctgtcagaccagaagaattccccctaccagtacatgttccgtctctgttac
cgggtgctgcgacactcacaggaagactaccgcaagaaccaggagcacatagccaagcag
ttcggggtgatgcagtctcagattggctatgacatcctggctgaggacaccatcactgct
ctgctgcacaacaaccgcaagctgctggagaagcacatcaccaagacggaggtggagacc
ttcgttagcctggtccgcaagaacagggaacccaggtttctggactacctgtcagatctg
tgtgtgtccaacaacatggccattcctgtcactcaggagctgatctgtaagtgtgtgctg
gatcccaggaaccaagacatcctcataaagactgaacggcgtgtggccaaagagattccc
agtgccactgaatacatgggcatggaggagtatgctgacgatgatgaggtgtggctggtc
tggactgacaagaccaatgagaagcaagagaagggcatcagacagctagcccaggaggcc
agacaggggaacgctcatgacgagaacgtgctcacgtactacaggtaccagctgaagctg
tatgcacggatgtgtctggaccgccagtacctggccatagatgagatctccaagcagctg
gatgtggagctcatcttcctgtgcatgatggacgagacactaccctttgacctgcgcgcc
tctttctgcagactgatgctgcatgcgcacgtcgaccgagacccccaggagctggtcacg
cccgtcaagttcgcccgtctctggacagagatccccacttccatcacaattaaagattat
gactccaacatggatgactcgcgggacaataagaagaacaagtttgccaacaccatggtg
ttcatggaggagtacctcaacaacgttctcaatgatgacttgcctttcgctgacgaggaa
aagaacaaactgacctatgaggtagtgagcttggccagacacctcatctactttggcttc
tacagtttctttgagctgctaaggttgacacggacccttctgggaatcatcgactgcatc
cccaacccttcactcatcaaccccatgttccaggacgatggcagtgggaagaacatgaag
cgttccatccatggtgttggccagattatgtccaccatggtactgagcaggaaacagtcc
atgtttggaggtccaggccggagtgcttccaacatagagggccagaaccgcagcaaggac
agcatcgacaaacaggacgtcactgtcatggacaccaagctgaaaatactggaaattctg
cagtttatcctgaatgtccgcttggactatcggctctccttcctgctttctgtcttcaag
aaggagtttgttgatgtttatcccatggcagatgccgatgctacaacatcaatggagcaa
acagccaccatcaacctgcagcacataggagagcaggcagaggccatgtttggtgtgggg
aaggggaacagtattctggaggtggatgatgagggaggtcgtatgttcctgagggtgctg
atccatctcaccatgcatgactaccctcctctggtctctggagctctacagctgctcttc
aaacacttcagccagagacaggaggtgttgcacacattcaaacaggtccagttgctgatc
tcgggccaggatgttgataactacaagctgataaagagcgaccttgaccatctccgcacc
acggtggagaagtctgagctctgggtggacaagaagagcagctctggaggaggggagggg
aagaaagacaagaaggacaaaaaagagaatgtagagatggcctcagaggatgcgaccccc
aagaaagagaagtctgaaaagagcaatgagaactaccagaaagtcaaagatatcttggag
cgtctgaataagatgtgcagctcgggtgtgtggaagaaacagcagagactcctgaagaac
atgggagcccacaaagtgatgctggacctgctgcaggtgtcgtacgatcagcatgacacc
aagatgcaggggatcatcaagagcactcacctgttcctgcagaagttctgcatggggaac
ctggagaaccagatgctccttcataagaacctcagcctctttctcaacccaggactcatg
gaggcagagacagtgcagcacatctttagcaataactaccagctgtgtacagagatcagt
gagaacgtgctgcagcatttcatccactgcctggccactcacggacgccacgtacagtac
ctcaacttcctgcacaccatcatcaaggccgagggcaagtacgtgaagaagtgccaggac
atgatcatgactgagttaaccaatgctggggaggatgtggtggtgttttataatgacaag
gcgtcattttccaccatgctggagctgatggcagagtccagggagggggttcaggagaac
agccccctgcgctaccacatctctctggtggagctgctatctgcctgcgctgagggcaag
aacgtctacacagagatcaaatgtacctcactgctgcccctagaggatgtggtgagagtg
gtcacacatgaggactgcatcacagaggtgaaggttgcctatgtgaactttgtgaaccac
tgctacgtagatacagaggtagagatgaaggagatttacaccagcaatcacatctggaaa
ctgtttgaggacttcactgtggacatggccagggtgtgtaacaagagagagaagcgtctg
actgaccctatcctggagaagtacatcatcaacgtggtgtttgataccatcaatgccttc
ttcagctcccctttctctgaaaacagcacctctctacagacccaccacaccatagtgaca
cagctgctccagtctagcatgcgtctgctggactgtccctggctgcagcagcaacacaga
ggcctggtggagacctgcatccgcaccctggccatgacagcaaagtgtcgctccatttcc
ctgcctctggacctggagtctcagatcaccaccatgctgagcagcagtgctcccaacgct
ctgtcccgctccaaccccaactacaagagctcgacccgctccagccgcccctccgccccc
aacaacccctgggattacaagaacattatcgagaagctgcaggacatcatcaacaccctg
gaggagcgtctgaagccgctggtgaacgctgaactgtctgttctggtggacgtcctgcag
cagcctgaactcctcttcctggaagggacggacgcacgacaacgctgcgaatcaggaggc
ttcatctccaaactgattcagcacactaaagccctgatgagctcagaggagaagctctgt
atcaaggttctgaggaccctgcaggagatgctcatacgcacactggactttgacgagaag
ggcattgcactgaggaaagtgctgctacagaactacctcttcaccaacaagaagaacaac
aagggagatctggttgaacatggagcaacaggtgctgaacaggagagagattgggcagct
gtagttgcagtccagtgtcgcctggacagggagggtggcacaaagctctttactgacctc
gtcatgagcaccaagaacgacaagatcttccaggagagcatccagctggccatatgtctg
ctggagggggggaacacagagatccagaactccttctacaagctgatgatgggggacaac
aagtctgagaagttcttcaaggttctccacgaccggatgaaaaacgcccagatggacatc
aaggccaacgtatcagtcagcgtgggagagatgagtaacaaagccaatgacaacaaagac
ctggacaccagctctggtgggttggttctacctgcgactactctgcctctcttggccccc
tccattggccaggtccctgtcactgccctggcctcagagcctgagcagaaggaggtggag
acagagatgggccctgcaatcatcattatgaaacccatcctgcgcttcctccagctgctc
tgtgagaaccacaaccaggatctgcagaacttccttcgctgccagaacaacaagaccaac
tacaacctggtgtgtgagacactgcagttcctggacatcatgtgtggcagcaccacggga
ggcctgggcctgctgggtctctacatcaacgagagcaacgtgggcctcatcacccagacc
ctggagacgctcacagagtactgccagggcccctgccaggagaaccagacttgtatagtg
acccatgagtcgaacggcatcgacatcatcacagccctcatactgaatgacatcagtcct
ctgtgtcgttaccgcatggagatggtgctgcagctcaaggacaacgcctccaagctgctg
ctggctctgatggagagtcgccatgacagcgagaatgcagagaggatactgttcaacctc
cgacctcgggaactggtgaaggtgataaagaaagcctaccagcaggagagtgaatgtgaa
ggtggagaggtttcacctcaagaggtcggccacaacatctacatcctggcacttcagctg
gcgaggcacaataagattttactcaatctgctgaaacctgcaaagaggaccaaggaggga
gaggagggcatatcctctatgttgaacctgaacaaccggccgctctcacaaatgttgaaa
tctaccgtgccggtagagagtgaggagcaggacccactggagttctatgatcagcacact
tcacagatagagattgtacgtgaggaccgcagcatggagcagatcgtgtttcccattcat
cccatctgtgagttcctgacggaggagtccaagttccgtgtgttcaacaccacagagcag
gacgaacagggcagcaaggtcacacacttcttccagcaggcctccttcctccacaacgag
atggagtggcagaagaagctccgcagtatgccggtgctgttttggttctctcgcaggatg
agcacatggggcagcatctcctttaacctggccgtcttcatcaacctcatcatcgccttc
ttctacccctacgactcaggccaaggtgcgatagatgactcgatgctgtccatgctgttc
tggggcttcctgggtctgtctgtcatgggcatgttctccaaacgctacggcctcaggccc
ttcactgtggccctcatactgcgctccatatactgctttggcatcggccccactctcatc
ctactgggcaccctcaatctgataaataagatagtgtttgtggtgagcttcgtgggcaac
aatgggacatttatcatgggctaccgtgcgatggtgatggatgtggagttcctttaccac
ctggcctatgttctgaccagcaccctggggctctgtgtccacgaactcttctacagcttc
ctgctgtttgatctgatctatcgagaggagaccctgttcaatgtgataaagagtgtgacc
cgtaatgggcgctccatcctgctcactgccctgctggccctcatcctggtctacctgttc
tccatcgtgggcttcctctgcctcaagaacgacttcatcatggaggtggaccctctgcct
cagatagactcaggaggacatggcaatgagaaggcgtcccaggacttcctgaactcctgc
agtggagatggagtcagctgcactgccgaggcaggactccctgctgaacctgatgaggag
aacaattcggagcgggcctgtgacactctgctcatgtgcattgtcactgtgctgaaccac
gggctgaggaacggtggtggggtgggagacgtgctacgcaagccctccaaaaacgagcca
ctgttcccagcccgcgtcatctacgatctcctcttctactttatcgtcatcatcatcgta
ctcaacttgatctttggtgtcatcatcgacaccttcgctgacttgcgtagtgagaaacag
aagaaagaggaggtcctcaagaccacctgcttcatctgtggtctggagagagacaagttt
gacaataaaacggtgtcttttgaggagcacataaagttggagcacaacatctggaactac
ctgtatttcatcgtgcttgttcgcgagaagaacaaaactgactacacaggtccagagagt
tatgtggcactcatgataaagagtaagaacctggactggttcccccgcatgcaggccatg
tccctggtggtgacggatggagacggggagcagaatgaaatgaggaacctgcaggacaga
ctgacgtccactatgaacgtggtcagccaactcacaggacagctaacagagctcaaagag
cagatgacggagcagaggaagaggaggcagaggatgggcttcgtggagtcaggaggagct
ggtgcagctagtatatcccccagtgctgctggaggaaaccaccagatgtacaacaaaccc
tga
DBGET
integrated database retrieval system
