Coregonus clupeaformis (lake whitefish): 121538362
Help
Entry
121538362 CDS
T08357
Name
(RefSeq) potassium voltage-gated channel subfamily D member 1-like
KO
K04891
potassium voltage-gated channel Shal-related subfamily D member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121538362
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
121538362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DUF3399
BTB_2
Ion_trans_2
Shal-type
BTB_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121538362
NCBI-ProteinID:
XP_041702223
LinkDB
All DBs
Position
24:28643787..28723147
Genome browser
AA seq
635 aa
AA seq
DB search
MAAGVATWMPFARAAAVGWLPLAQKTMPKPPVDKKSRSDEILFVNVSGLRFQTWKNTLDR
YPDTLLGSSEKEFFYNEETQEYFFDRDPEMFRHILNFFRTGKLHYPRHECIQAFEEELAF
YGIIPEIIGDCCMEEYRDRKKENQERLAEDTEAENAGDAPLPPDATLRERLWRAFENPHT
STMALVFYYVTGFFIAVSVIANVVETVPCRPLKGSIKDLPCGEKFSVGFSCLDTACVLIF
SFEYLMRLYAAPSRCDFVRSVMSVIDVVAILPFYIGLVMPENEEVSGAFVTLRVFRVFRI
FKFSRHSQGLRILGCTLQACASELGFLLFSLTMAVIIFATVMFYAEKGTKGTTFSSIPAS
FWYTIVTMTTLGYGDMVPDSIAGKIFGSICSLSGVLVIALPVPVIVSNFARIYHQNQRAD
KMRAQQKVRQARIRMAKKGATNAFLQHKEDGGLQDGDSDSTPLCVKNRSAFEHQHHHLLH
CLEKTTNHEFTDEVTYSEVCMTDSVGFRTSRSTSLSSQQGATTTCCSRRAKRRAIRLANS
TVSVSRGSVQELDTLHITKTPAGTQYPQSRSSLNARTEDLKLNCDDYTAAIISIPTPPAN
TPDESLPNSPAIPGILRNSRSSTYNTQETVKISSL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggagttgcaacatggatgccctttgctcgggcagcagccgtaggctggcta
ccactggcccaaaagaccatgcccaagcctcctgtggacaaaaagagtcgcagtgatgag
atcctgtttgtaaatgtgagtggactacgttttcagacatggaagaacaccttggaccgt
tacccggacacccttctaggcagctcagaaaaggagtttttctacaacgaggaaactcag
gaatatttctttgacagggatccagagatgtttcgccatatactcaacttttttcgaaca
ggcaagctacattacccccgacatgaatgcattcaggcttttgaggaagagctggcattc
tatggcataatacctgagatcataggtgactgctgtatggaagagtaccgggatcgcaag
aaggagaaccaggagcgtttggctgaggacacagaggcagaaaatgccggagacgctccc
ctgcccccagatgccacgttacgagagaggctatggagggcctttgagaaccctcacaca
agcaccatggccctggttttctactacgtcactggtttcttcatcgctgtgtctgttatt
gccaacgttgtggaaacggttccctgccgaccactcaaagggagtataaaggacctgccg
tgtggtgagaagttttcagtgggcttctcttgtttggacacggcctgtgtgcttatcttc
tccttcgagtacctcatgaggctttatgctgcccccagccgctgtgattttgtgcgttcg
gtgatgagcgtgatagacgtggtggccatcttgcccttctacatcggccttgtcatgcca
gagaacgaggaagtcagcggggcctttgtcaccctgcgagtcttccgggtgttccgtatc
ttcaagttctcccgtcactctcaggggctgcgtatcctgggctgcacgctgcaggcctgc
gcctcggagctgggcttcctcctcttctctctcaccatggccgtgataatctttgccacc
gtcatgttctacgctgagaaaggcaccaaaggcaccacgttttccagcatcccagcctcc
ttctggtacaccatcgtcaccatgacaacactgggatatggagacatggttccagactcc
atagcgggcaagatatttggctccatctgctccctcagtggtgtgctggtgattgctcta
cctgtgcctgttatagtctccaacttcgcgaggatctaccaccagaaccaaagggcagat
aagatgagggcacaacagaaagtgcgccaggcaaggattcgaatggctaaaaaaggggcc
accaatgcattcttgcagcacaaagaggatgggggattgcaggatggtgatagtgacagc
acacctctttgtgtgaagaacaggtccgcctttgagcaccaacatcatcacctgttgcac
tgcttggagaaaaccaccaatcacgagttcacagatgaagtcacatacagcgaggtgtgt
atgaccgactcagtgggcttccgcaccagccgcagcacttcgctgtccagccagcagggg
gccaccaccacctgctgctcccgccgggccaagaggagggccatccgccttgccaactcc
actgtctctgtcagccggggcagtgtgcaggagctggacacgctgcacatcaccaagact
cctgctggtacccagtacccacagagtcgctccagtctaaatgccaggactgaagacctg
aagctgaactgtgatgactacacagcagccatcatcagtatccccactcccccagccaac
actcctgatgagagcctacctaactcgcccgccatccctggcatcctacgcaactctcgc
tccagtacctataacacccaggaaactgtcaagatctcctctttataa
DBGET
integrated database retrieval system
