KEGG   Coregonus clupeaformis (lake whitefish): 121538407
Entry
121538407         CDS       T08357                                 
Name
(RefSeq) bile acid receptor isoform X1
  KO
K08538  farnesoid X receptor beta
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121538407
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:cclu03310]
    121538407
Transcription factors [BR:cclu03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    121538407
Nuclear receptors [BR:cclu03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   121538407
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 121538407
NCBI-ProteinID: XP_041702299
LinkDB
Position
24:24426267..24448747
AA seq 531 aa
MPLRGAEIHHTATDFSCTPPRWTTIKRVFLGTDCGSAVQMREWSESEMTMSAGGYLSTFD
GYGITEPLQYYDVLGDPLGYPFQEPDLQVLAFSQQQYSPVNVQFSVYEPPSSQPCHPPYT
HPYSPHYLEAPCEPSPEPQCGGLGKGGGGVGLPLVKRTRLGPGGRVRGLDELCVVCGDKA
SGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGGCEMDMYMRRKCQDCRLRKCRAVGMLD
ECLLTEVQCQSKRLRKGAKHRGGGPEEEEIRESRSVSSTSRLPGQVVSANLSREQKHVLD
TMVEALRQYRVQDAGHCRVFEETCTEDGGDRLTDMASPPSQRLLQFAKSVPGFELLNCSD
QSTLLTSSSVEVMFLLSAQQFTQNPAASSPALQPFNISTHHWLKTLESKENIHSGTGPVN
SGVNEDLLGPVINFFHSMAALGVTEAEYALLTATALLCSADEASLRVVACVESLQELILE
LLSRVCGAWCGAQGPQGAQRFARLLGRLTELRTLRHNHLTLLRQQPWDSQP
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgcctctcagaggagcagagatccatcacactgccacagacttcagctgcacgcctccc
cggtggacaacaattaagcgggtgttcctagggactgactgtggatcagctgtccagatg
agagagtggagcgagtcggagatgaccatgtctgccggtggttacctctccacctttgat
ggatacggcatcaccgagcctctgcagtactacgatgtgctgggggaccctttgggctac
cctttccaggagccagacctacaggtcctagccttcagccagcagcagtacagccccgtc
aacgtgcaattctctgtctacgaaccaccttcctcgcagccctgccacccaccctacacc
cacccttacagcccccactacctggaggctccctgcgagcccagcccggagccccagtgt
ggaggcctggggaaagggggaggcggggtaggtctgcccctggtcaagaggaccaggctg
ggccctggagggagggtgaggggcctggatgagctttgtgtggtgtgtggagacaaagcc
tctggctaccattacaatgccctcacctgtgaaggctgcaaaggtttcttccgaaggagt
gtgacgaagaaagcagtgtaccggtgtaaaagtggcggaggctgtgagatggacatgtac
atgcggaggaagtgccaggactgccgcctgcggaaatgtcgtgctgtgggcatgctagac
gaatgtctgctgacggaggtgcagtgccagtcaaagaggctgaggaagggagccaagcac
agaggaggagggcctgaggaggaggaaatcagggagagcaggagcgtcagctccaccagc
aggttaccaggacaggtggtgtctgcaaatttgtcaagagaacagaagcatgtgctggac
acgatggtggaggctcttcggcagtacagggtgcaggacgcaggacactgtagggtgttt
gaggagacttgtacagaggatggtggagacagactaacggacatggcctcccctccctct
cagaggctgctgcagtttgccaagagtgtacctggctttgagctcctgaactgctcggac
cagagcaccctcctcactagttcctctgtggaagtcatgtttctgctctcagcgcagcag
ttcacccagaaccctgcagcttctagtccagcactacagcctttcaacatctcaactcat
cattggctgaaaaccttggagtccaaggaaaacattcatagtgggaccggccctgtaaac
tcaggagtcaatgaggacctgctaggacccgtgatcaacttcttccacagcatggcagca
ctgggggtgaccgaggctgaatatgccctgctcactgctacagcactgctatgctcagca
gacgaagcgtcgctgcgggtggtggcgtgtgtggagagcttacaggagctgatcttggag
ttgctgtccagagtgtgcggagcctggtgtggagcccagggccctcagggagcccagcgc
ttcgctcgcctgttggggagactcacggagctgcgcacgctacgacacaaccacctcacc
ctgctccgacagcagccctgggacagtcagccctga

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