Coregonus clupeaformis (lake whitefish): 121538407
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Entry
121538407 CDS
T08357
Name
(RefSeq) bile acid receptor isoform X1
KO
K08538
farnesoid X receptor beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121538407
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121538407
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121538407
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
121538407
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121538407
NCBI-ProteinID:
XP_041702299
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Position
24:24426267..24448747
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AA seq
531 aa
AA seq
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MPLRGAEIHHTATDFSCTPPRWTTIKRVFLGTDCGSAVQMREWSESEMTMSAGGYLSTFD
GYGITEPLQYYDVLGDPLGYPFQEPDLQVLAFSQQQYSPVNVQFSVYEPPSSQPCHPPYT
HPYSPHYLEAPCEPSPEPQCGGLGKGGGGVGLPLVKRTRLGPGGRVRGLDELCVVCGDKA
SGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGGCEMDMYMRRKCQDCRLRKCRAVGMLD
ECLLTEVQCQSKRLRKGAKHRGGGPEEEEIRESRSVSSTSRLPGQVVSANLSREQKHVLD
TMVEALRQYRVQDAGHCRVFEETCTEDGGDRLTDMASPPSQRLLQFAKSVPGFELLNCSD
QSTLLTSSSVEVMFLLSAQQFTQNPAASSPALQPFNISTHHWLKTLESKENIHSGTGPVN
SGVNEDLLGPVINFFHSMAALGVTEAEYALLTATALLCSADEASLRVVACVESLQELILE
LLSRVCGAWCGAQGPQGAQRFARLLGRLTELRTLRHNHLTLLRQQPWDSQP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagaggagcagagatccatcacactgccacagacttcagctgcacgcctccc
cggtggacaacaattaagcgggtgttcctagggactgactgtggatcagctgtccagatg
agagagtggagcgagtcggagatgaccatgtctgccggtggttacctctccacctttgat
ggatacggcatcaccgagcctctgcagtactacgatgtgctgggggaccctttgggctac
cctttccaggagccagacctacaggtcctagccttcagccagcagcagtacagccccgtc
aacgtgcaattctctgtctacgaaccaccttcctcgcagccctgccacccaccctacacc
cacccttacagcccccactacctggaggctccctgcgagcccagcccggagccccagtgt
ggaggcctggggaaagggggaggcggggtaggtctgcccctggtcaagaggaccaggctg
ggccctggagggagggtgaggggcctggatgagctttgtgtggtgtgtggagacaaagcc
tctggctaccattacaatgccctcacctgtgaaggctgcaaaggtttcttccgaaggagt
gtgacgaagaaagcagtgtaccggtgtaaaagtggcggaggctgtgagatggacatgtac
atgcggaggaagtgccaggactgccgcctgcggaaatgtcgtgctgtgggcatgctagac
gaatgtctgctgacggaggtgcagtgccagtcaaagaggctgaggaagggagccaagcac
agaggaggagggcctgaggaggaggaaatcagggagagcaggagcgtcagctccaccagc
aggttaccaggacaggtggtgtctgcaaatttgtcaagagaacagaagcatgtgctggac
acgatggtggaggctcttcggcagtacagggtgcaggacgcaggacactgtagggtgttt
gaggagacttgtacagaggatggtggagacagactaacggacatggcctcccctccctct
cagaggctgctgcagtttgccaagagtgtacctggctttgagctcctgaactgctcggac
cagagcaccctcctcactagttcctctgtggaagtcatgtttctgctctcagcgcagcag
ttcacccagaaccctgcagcttctagtccagcactacagcctttcaacatctcaactcat
cattggctgaaaaccttggagtccaaggaaaacattcatagtgggaccggccctgtaaac
tcaggagtcaatgaggacctgctaggacccgtgatcaacttcttccacagcatggcagca
ctgggggtgaccgaggctgaatatgccctgctcactgctacagcactgctatgctcagca
gacgaagcgtcgctgcgggtggtggcgtgtgtggagagcttacaggagctgatcttggag
ttgctgtccagagtgtgcggagcctggtgtggagcccagggccctcagggagcccagcgc
ttcgctcgcctgttggggagactcacggagctgcgcacgctacgacacaaccacctcacc
ctgctccgacagcagccctgggacagtcagccctga
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