Coregonus clupeaformis (lake whitefish): 121538434
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Entry
121538434 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121538434
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121538434
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121538434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIB_HERC2
SH3_15
Ank_2
Ank
Ank_5
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
TerY_C
Sina_RING
Motif
Other DBs
NCBI-GeneID:
121538434
NCBI-ProteinID:
XP_041702361
LinkDB
All DBs
Position
24:complement(23410447..23488800)
Genome browser
AA seq
1044 aa
AA seq
DB search
MVSCDSGIQLFKMFRNGLPIMGITPDLVPESLVPPVVPSLPSARARPALHRPRRRSGNNS
SSGGDPTRPWPLGPAVPRGSMEVGMRVVRGLDWKWGNQDDGDGHVGTVVEIGRQGSTTTP
DKTVVVQWDSGTRTNYRTGYQGSYDLLLYDNAQIGVRHSNIICDSCKKHGIMGMRWKCKV
CFDYDLCTQCYMNNKHDLGHAFERYETAHSQPVCLAPRQNLPRIILKGIFQGVKVVRGPD
WDWGNQDGGEGKVGKVVDIRGWDTESGRSVASVTWSNGTTNVYRMGHKGKVDLKYVSDVQ
GGFYYKDHLPKLGEHAELQRQESAEGHTFNQGDKVKCLLEVDILRQMQEGHGGWNPKMAE
YTCRIGTVHRITDRGDVRVQYSNNIRWTFHPGALTKVNTFVVGELVRVLEDMDSVKRLQA
GHGEWTDSMAPALGQVGKVLKVYADGDLRVAFNGQTWTFNPACLSTQPVEVDANLMTAEN
HNVSGNTVISVLEKLLSQSTEQDNPSRLVIEAAHGSANKVRELVQKYPDKVDIKNQGKTA
LQVAAHQGHMEVVLALLQANSSIEVKDEDGDTALHYTAFGNQAEIARLLLSKGANVNLLN
NSMCTALHIAVNKGFTDVVRVLSEHSADINLQDSYGDTPLHDVIAKDFRNIIEILVVVPN
IDFTQQNNRGFNLLHHAALKGNKLATEKILARARQLVDVKKEDGFTALHLAALNNHRDVA
EILVKEGRCDVNIRNNRNQTPLQLAVTQGHGDLVQLLVAEGADVNVEDEDGDTAMHVALS
RPQLANATLTPATTSTTTTTQGRGEGCPGSSSSLLYCQLSSSGLMGNTELSVGAAIACFL
AQEGADINYANHKGKSPLDLVADTAVLQLIKSFSEKQRLQRLQAITCGTSLSSTSLRRVH
TTPNTMTNLAMPALPGPSECLICSELALLVLFCPCQHSVACEECAHRMKKCIKCQVTITK
KIRQDQTEVDCSPGSENSEQHNLLEQLQSRYRQMEERITCPICIDNHIKLVFQCGHASCI
DCSAALKTCPICRQTIRERIQLFV
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcctgcgactctggaatacagctcttcaagatgttcaggaatgggctgccgatc
atgggaatcacacctgatctggtcccggaatccctggtaccacccgtggtgccttccctg
ccctcagcacgggcccggcctgccctgcacaggccccgtaggcgcagcggcaacaacagc
agcagcggaggcgaccccaccaggccgtggcccttgggcccggcagtccccagaggaagc
atggaggtgggcatgcgcgtggtgcgcggcctggactggaagtgggggaaccaggacgat
ggtgacggccacgtgggcacggtggtggagatcgggcggcagggcagcacgaccacgccc
gacaagacggtggtggtgcagtgggacagcggcacacgcaccaactaccgcacaggctac
caaggctcctacgacctgctgctctacgacaacgcccagatcggtgtgcgccactccaac
ataatctgtgacagctgcaagaagcatggcatcatggggatgcgctggaagtgtaaggtg
tgctttgactacgacctgtgcacgcagtgttacatgaacaacaagcacgacctgggccac
gcctttgaacgctatgagaccgcccactcccaaccagtgtgcttggccccgaggcagaat
ctcccacggatcatcctcaaaggaatcttccagggggtgaaagtggtacgcggacccgac
tgggactggggcaaccaagacggaggagagggtaaggttgggaaggtggtagacatccgt
ggctgggacacagagtccggtcgcagtgtggccagtgtcacctggtccaatggtaccacc
aacgtctaccgaatgggtcacaagggcaaggtagacctcaaatacgtgtctgacgtccag
ggaggcttctactacaaagaccacctaccaaagctgggtgagcacgcagaactgcagagg
caggagagtgcagaaggccacaccttcaaccagggggacaaggtgaagtgtctcctggag
gtggacatcctcagacagatgcaggagggccacggtgggtggaaccccaaaatggcagag
tacacctgcagaatcgggacggtacacagaatcactgaccggggagatgtccgagtccag
tacagcaacaacatccgctggaccttccacccaggggccctaaccaaggtgaacacgttt
gttgtgggcgagctggtgcgtgtgctggaagacatggacagtgttaagaggcttcaggca
ggccacggagaatggacagacagcatggcacccgccctggggcaggtgggcaaggtgctg
aaggtgtacgctgatggggacctgcgcgtggccttcaacggccagacgtggacctttaac
ccggcgtgcctctcgacccaacccgtggaggtggacgccaacctcatgacggccgagaat
cacaacgtatccggaaacacagtcatttcagtcctggagaagctgctgtctcagtctaca
gagcaggacaaccccagccggctggtcatcgaggctgcacatggcagtgccaacaaagtc
agagagcttgtgcagaaataccctgacaaggtggatataaagaaccagggcaagacggcg
ctgcaggtggcagcccaccagggccacatggaggtggtcctggctctgctgcaagccaac
agctccatcgaagtgaaggacgaggacggagacactgccctgcattacacggccttcgga
aaccaggcagagattgcacggctattgctgagcaagggggccaacgtgaacctgctcaac
aactccatgtgcacggcgctgcacatagccgtcaacaagggcttcactgacgtggtgcgc
gtgctgtcggaacactcagccgacatcaacctacaggactcgtacggagacacaccgctg
cacgacgtcatcgccaaagacttccggaacatcatcgagatcctggtggtggtgcccaac
atagacttcacccagcagaacaaccgcggcttcaacctgctgcaccacgcagccctcaaa
ggcaacaagctggccacagagaagatcttggctcgggcgcgtcagctggtggacgtcaag
aaggaggacggcttcacagctctgcacctggccgccctcaacaaccaccgagacgtggct
gagatccttgtgaaagagggccgctgtgacgtcaacatccgcaacaaccgcaaccagacg
ccgctgcagctggcggtgacgcaaggccacggggacctggtgcagctgctagtggccgag
ggcgcggacgtcaatgtggaggacgaggatggggacacggccatgcacgtcgccctcagc
cgcccgcagctggccaacgccacgctcacccccgccaccaccagcaccacgaccaccacg
caggggagaggagaggggtgcccgggctcgtcatcgtccttgctctactgccagctgagc
agctcggggctgatgggtaatacagagctgagcgtgggcgcagccatcgcctgtttcctg
gcacaggagggcgccgacatcaactacgccaaccacaagggcaagagcccgctggacctg
gtggctgacacagccgtgctgcagctcatcaagagcttctccgagaagcagcggttgcag
cggctgcaggcaatcacatgcggcacgtcactgagcagcaccagcctgcggcgggtccac
accacccccaataccatgaccaacctggccatgcccgccctgccggggcccagcgagtgt
ctcatctgctccgagctggccctgctcgtcctcttctgcccctgccagcacagcgtcgcc
tgcgaagagtgtgctcatcgaatgaagaaatgcatcaaatgccaggttacaatcaccaag
aaaataagacaagaccagacagaggtggactgcagcccgggctcggagaactcggagcag
cacaacctgctggagcagctgcagtcacgctaccgccagatggaggagcgcatcacctgc
cccatctgcatcgacaaccacatcaagctggtctttcagtgtggccacgcctcctgcatc
gactgcagcgccgccctcaagacctgccccatctgcaggcagaccatccgcgagcgcatc
cagctcttcgtttga
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