Coregonus clupeaformis (lake whitefish): 121538461
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Entry
121538461 CDS
T08357
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121538461
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121538461
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
pre-PUA_NIP7
SAE2
Motif
Other DBs
NCBI-GeneID:
121538461
NCBI-ProteinID:
XP_041702424
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Position
24:22536795..22542561
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AA seq
331 aa
AA seq
DB search
MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHSPLIVKVWHRELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFAKDFETVLVDACSHVAREADDGCRRPMDRLLTIWQERSLYKAE
FIQQLKLAIEDSNSPQHQPTEEKKAPKRTYQKMIQEPEEEEDDDYRGNMSPQDSDISGPQ
LTEELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAADKLSKTVDEACL
LLAEYNGRLAAELEDRRQLARMLTEYIGSQKEALTEREKKLEEYKQKLARVTQVRKELKS
HIQSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttttctgagtctgcgttggagaagaagctttcggagctcagcaactctcaa
cagagcgttcagacgctgtctctgtggatcattcatcatcgcaaacactcgccgctcatc
gtcaaagtatggcacagagaactgaagaaagcaaaaagcagcaggaagttgactttcctg
tatcttgccaatgacgtgattcaaaacagcaagaagaaaggtccagagttcgccaaagac
tttgagacggtccttgttgatgcttgctctcatgttgcaagagaggcagatgatggctgc
agaaggcctatggacaggctgctcactatctggcaggagcgcagcctctacaaggcagag
ttcatccagcagctgaagcttgccatcgaagactcaaacagcccccaacaccaacccaca
gaggagaagaaggcccctaaacggacctatcagaagatgatccaagagccggaggaagag
gaagacgatgactacaggggcaacatgtccccacaggattcagacatctcagggccacag
ctgacggaggagctggtcaaagccctgcaggacctggagaatgctgcctcgggtgatgct
gctgtgcgccagaagattgcctctctgccacaggaggtgcaggatgtgtccctgctagag
aagatcactgataaggaggcagctgataaactttctaagacggtggacgaggcctgtcta
ctgctggctgagtataacggacgtctggctgctgagctggaggacaggaggcagctggcg
cgcatgctgacagagtacatcggtagccagaaggaagccctcaccgagagggagaagaaa
ctagaagagtacaaacagaagctggcacgggtcacccaggtgcgcaaggagctcaagtct
cacatccagagcctgcctgacctctctctgctgcccaatgtgacgggaggcctggcccct
ctaccctctgctggagacctgttctccaccgactga
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