Coregonus clupeaformis (lake whitefish): 121538474
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Entry
121538474 CDS
T08357
Symbol
taf11
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121538474 (taf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121538474 (taf11)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121538474 (taf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Motif
Other DBs
NCBI-GeneID:
121538474
NCBI-ProteinID:
XP_041702449
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All DBs
Position
24:complement(8602625..8604594)
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AA seq
201 aa
AA seq
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MADPARIKTESNSEKSLAARKSPKTEDTEEVPVTSDADTESKDPSSQSLKREQDSVAGED
EDEGTSGQPASKKLKVEPEKKKEKRQKVDEDEIQKMQVLVSSFSEEQLNRYEMYRRSAFP
KAAIKRLIQSITGSSVSQNVVIAMSGISKVFAGEIVEEALDVCEKWGDTPPLQPKHMREA
VRRLKSREQIPNTKHKNILFH
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccagctaggataaagactgaatccaactcggagaaatcattggctgctaga
aaaagccctaaaaccgaagacactgaagaagtgcccgtgacctcggatgcagacaccgaa
tcaaaagatccctcatcacaatcactcaaacgcgaacaggactctgtggctggagaggat
gaggatgagggaacctcaggtcaacctgcttccaaaaagcttaaagtggagcctgagaag
aaaaaggagaagcgccaaaaggttgacgaggatgagatacagaagatgcaggttttggtc
tcatccttctctgaggagcagcttaaccgctatgagatgtacagacgctctgccttcccc
aaagctgccatcaagaggctgatacagtccattacaggatcctcagtctctcaaaatgtg
gttattgccatgtctggtatttccaaggtcttcgctggagaaatagtggaggaagctctg
gatgtgtgtgagaagtggggggacacacctcccctgcagcccaagcacatgagggaggct
gtcaggaggctgaagagcagagagcagatccccaacaccaagcacaagaacatcctcttc
cactga
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