Coregonus clupeaformis (lake whitefish): 121538510
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Entry
121538510 CDS
T08357
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121538510 (apex2)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
121538510 (apex2)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
121538510 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
121538510
NCBI-ProteinID:
XP_041702551
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Position
24:9877014..9881851
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AA seq
594 aa
AA seq
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MKIVSWNINGIRTFKGGIKKALDSLDADIICVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTTNHEGTIGCYGDPREFSSEELQLLDNEGRA
VLTQHRVMCENRPETVTVINVYCPRADPEKPERKQFKLQFYKLLQCRAEAILEAGSHVIV
LGDVNTSHRPIDHCDPDAIDDFEDHPGRKWLNGLLVDDSEGKECEKDDDEESENTSSKPL
STGKFVDTFRHFHPTRSKAFTCWNTMTGARQTNYGTRIDYIFADHPLVKMGFVAADIMPE
VEGSDHCPIWGKLSCPILPSSKLPPLCTRHLPEFAGRQQKLSRFLVKVDQQQPAREACRD
PLPGSQEAGETRENLNPLGAAGTSATGKKRKLAVESGVPKGKKIKTLKAANPKPQGNLLA
FFKPKSTPVVPTRECPVSQCERGEERNEVTPSQPQTLKGGHSAGQDVPSITGTCTEDPQG
VCMGDKVLAPGSTMEDASVNSQNQGKDAALASEPTVDPSCPRKGASLGGFWKTVLRGPPP
PPPCKAHGEPCVLRTVKKAGPNMGKQFFVCNRPQGHASNPEARCNFFSWVDKGK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcagttggaacattaatggcataaggactttcaagggcggaattaaaaag
gcgcttgattcgctggatgcagacatcatatgtgtccaagagacgaaagtaacaagagac
ctgctggatgagaggactgctattgttgaaggttataactcctatttcagcttcagtcgt
ggacgcagcggctactcaggagttgctacttactgcaaagacagtgccaccccatttgct
gcagaggagggcttgaccggcctgctgaccaccaaccatgaggggaccattggatgctat
ggtgacccgagagagttctccagtgaggagctgcagctcctggacaacgagggaagggct
gttctcacacagcacagagtcatgtgtgaaaaccgacctgaaacagttacagttatcaat
gtatactgcccacgagctgacccagaaaagcctgaacgtaaacagttcaaattgcagttc
tacaagctgcttcaatgtcgggctgaagccattttggaagctgggagccatgtaatcgtc
ttaggagacgtgaatacatcccaccggcccatagatcactgtgacccagatgcaatagat
gattttgaggatcaccccgggaggaaatggctaaacggtttactggttgatgacagtgaa
ggaaaggagtgtgaaaaagatgatgatgaagagtctgagaatacctcctcaaaacccctc
agcaccggcaagtttgtggacaccttccgccattttcacccaacacgctccaaggccttc
acctgttggaacactatgactggagccaggcagaccaactatggcacacgtatcgactac
atcttcgcagaccatcccttggttaagatggggtttgtggcagcagacatcatgccagag
gtggaggggtctgatcactgccccatctgggggaaactcagctgccccatcctgcccagc
tccaagctgcctcccctctgtacccgccacctaccagagttcgctggcaggcagcagaaa
ctctcacgtttcctggtcaaggtggaccaacaacagcctgccagagaggcctgcagggac
ccactaccaggatctcaggaggctggggagacccgagagaacctgaatccactgggagca
gcagggaccagcgccactggaaagaagaggaagttggcagtggaatctggtgtcccaaag
ggcaaaaagattaagacactgaaggctgctaacccaaagccccagggcaacctcctagcc
tttttcaagcccaaatccacacctgtggtcccaaccagggaatgccctgtgagtcagtgt
gagaggggagaagagagaaatgaagtgaccccatcacagccacagaccctcaagggagga
cattctgcaggacaagatgtcccttcaattacaggcacgtgcacagaagatccccagggt
gtctgtatgggagacaaagtccttgcacctggcagcaccatggaggatgccagtgtcaat
agtcaaaaccaggggaaggatgcagccctggcttcagagcctactgtagacccctcatgt
cccaggaagggggcgtcactgggggggttctggaagacggtcctgcgtgggccaccccca
ccgcccccctgtaaggcgcatggggaaccctgtgtactccgcacagtcaagaaggcaggg
ccaaacatgggcaagcagttctttgtgtgtaaccgccctcagggccatgcatccaatcct
gaggctcgctgtaacttcttttcctgggtggataaaggaaaatag
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