Coregonus clupeaformis (lake whitefish): 121538519
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Entry
121538519 CDS
T08357
Name
(RefSeq) WD repeat-containing protein 13
KO
K24739
WD repeat-containing protein 13
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121538519
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121538519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
EIF3I
Beta-prop_Aladin
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_EMC1_N
Beta-prop_NUP159_NUP214
RPOC_hybrid
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
121538519
NCBI-ProteinID:
XP_041702564
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Position
24:complement(10006974..10015808)
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AA seq
482 aa
AA seq
DB search
MAAVWQQVLAVDARYNAYRTPTFPQFRTQYIRRRSQLLRENAKCGFEPGLRRHYLRLRSQ
LLALRYGPLSEQSSFRASSVRSSRTTLDRMEDFEEDPRALGARGHRRSVSRGSYQLQAQM
NRAVYDERPPGALVPTSVAEASRAMAGDTTLSENYAFAGMHHIFDQHVDSAVPRLQFAND
DKHLLACCSLDGTLSIMILSPSPPSVKVVLKGHAGPVTDFAWSLSNDVIVSTSKDGTLRI
WNTEDGRCIREVRDPESSELLCCTFQPMNNNLTVVGNSKHLLQVVNISTGKKVKGGSSKL
TGRVLSMSFDAPGRILWAGDDRGSIFSFLFDMATGKLTKAKRLVVSEGSPICSISARSWI
SREARDPSLLINACVNKLLLYRVVDNEGTLQLKRSFPIKHGSQPLHSIFCPLMSFRQGAC
IVTGSEDACVYFFDVERNTKAIVNKLQGHGGPVLDVSFNCDESLLASADSTGMVIIWRRE
QK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtttggcagcaggtgttggcagtggacgcaaggtacaatgcataccgcacg
cctacgttcccacagttccgcacgcaatacatccgccggcgcagccagctactcagggag
aacgccaagtgtggctttgagccggggctgcgcaggcattacctgaggctgcgcagccag
ctgctggccctgcgctacgggcccctgtctgagcagagcagcttcagggccagcagtgtg
cgcagctcccgcaccacattggaccgcatggaggattttgaggaggacccccgtgctctg
ggggctcgtgggcaccgtcgatctgtgagcagaggctcctaccagctacaggcccagatg
aacagggcagtctatgatgagaggcccccaggtgccttggtgccaacctctgtggcagaa
gctagccgtgccatggccggggacaccactctgagcgagaactatgcttttgctggcatg
caccacatattcgaccaacatgtggactctgcagttccacggctgcagtttgctaacgat
gacaagcacctcctagcctgctgctcattggacggcaccctgtccatcatgatcctgtcc
ccgtccccgcccagcgtgaaggttgtactgaagggtcatgcaggtcccgtcaccgacttt
gcttggtcccttagcaatgacgtcatcgtgtcgacatcaaaggacggaacgctgcgtatt
tggaacacggaggatgggaggtgtatccgtgaggtcagagacccggagtcaagcgaactg
ctttgttgcaccttccagcccatgaacaacaacctgacagtggtagggaacagtaagcac
ctcctgcaggtggtgaacatctccactgggaagaaggtgaaggggggttccagtaagctg
acgggacgggtactgtctatgtcctttgatgcccctgggaggatcctgtgggccggggat
gacaggggcagcatcttctccttcctgtttgacatggccacagggaagctgaccaaagcc
aagcggcttgttgtgagtgagggcagcccgatctgcagcatatctgcccgctcctggatc
agcagagaggctcgagacccctccctgttgatcaatgcctgtgtcaacaaactgctactc
tacagagtggtggataatgaaggcactctgcagctgaagaggagcttccccatcaagcac
ggctcccagcccctccacagcatcttctgccctctcatgtccttcagacagggcgcctgt
attgtgactggcagtgaggatgcctgtgtctacttcttcgatgtggagcgcaacactaag
gccatagtcaacaaactgcagggtcacggtggcccagtgctggacgtcagcttcaactgt
gacgagagcttactggcttctgcagactccactggtatggtcatcatctggaggcgggag
cagaagtga
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