Coregonus clupeaformis (lake whitefish): 121538564
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Entry
121538564 CDS
T08357
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1-like isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121538564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121538564
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121538564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ_SEC7_PH
Sec7
SOS1_NGEF_PH
PH_19
RHG20_PH
Shugoshin_N
bZIP_2
Motif
Other DBs
NCBI-GeneID:
121538564
NCBI-ProteinID:
XP_041702633
LinkDB
All DBs
Position
24:complement(43309353..43511188)
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AA seq
1241 aa
AA seq
DB search
MESPTENPTRAAEYLKELNNIIETQQELLERHKTRIEELELQVSDLCSENACLKDQYQRH
LATCRLLQQGNSHATLGVIKENITQEKSECDSSRMVRRHASLPIDVTENPASLVSASCRR
GFPCRKWKSASFGVEGDARPSESDGGASYRGPVISPDRFEGPLYGHGVQPGPQRPPRRPK
LQHSQSILRKQAEEEAIKRSRSLSEGYELSADLQDKQVEMLERKYGGRFITRHAARTIQT
AFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSLTDDG
TPLALVQSECGDLEVHHQANMASHPASQNDLTDAITELEDAFSRQVKSLAESIDDALNCR
SQQGDEGLDPEAMGCPKVEREVAYQVKPHRGATGRMREDMMASYSDVTLFIDEEELSPSM
GLSRGSADQPSSIESDLRLRSANSSQEYWPLDPKDEGRDTDTSCRSTPSLECQEQRLRVD
HLPLLTIEPPSDSSAEHSDRSDRSSVKRPPVYEPHGGSHIVASSQASPKHISHGPPPRAA
SRDDEAPLRHRHRALESHLAINGSANRQSKSESDFSDGDNDSINSTSNSNDTINCSSESS
RDSLREQTLSKQTYHKETRNSWDSPVFSNDVIRKRHYRIGLNLFNKKPEKGVQYLTERGF
VPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSSMELDEALRKF
QNHIRVQGEAQKVERLIEAYSQRYCICNPTVVRQFRNPDTIFILAFAIILLNTDMYSPNV
KPERKMKLEDFVKNLRGVDDGEEIPRETLVGIYERIRKRELKTNEDHVSQVQKVEKLIVG
KKPIGSLHHGIGCVLSLPHRRLVCYCRLFEVPDPNKLQKLGLHQREIFLFNDLLVVTKIF
QKKKNSVTYSFRQSFSLYGMQVLMFENQYYGNGIRLTSAIPGADIKVLINFNAPNPQDRK
KFTDDLRESIAEVQEMEKYRIESELEKQKGVVRPSMSQSSGLKKEAGNGNMNRASLDDTY
TMGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHICRRATTPRIEGPS
RGHPTIPNSSSLLGSLFGSKRGKPSSQSHPPLPLPGHPTLISHTPHPSNLHHTAQQVAQA
QLHHSQYCHVQQNPPPYHHHHHYHPPPHTQYHQHPAAYASSSHTHQHTHPHAHVPQHSHG
AHSQHSHHASHSQHAPHHHSQQQGPAPGGPKPKHSGISTVV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcccgaccgagaacccaaccagggctgcggagtatctgaaggagcttaataac
attatcgagacccaacaggagttactggagaggcacaagactaggatagaggagctggag
ctgcaagtttccgacttgtgttcggaaaacgcctgcttgaaagaccagtaccagcggcac
ctggctacgtgtaggctgctgcaacagggcaacagccacgcaacgttaggcgttataaag
gaaaacatcacccaagaaaaatctgaatgtgacagctccagaatggtcaggagacatgcc
tctctgcccatcgacgtcacagagaaccctgccagtctggtgtcggccagctgtaggaga
ggtttcccctgccgcaagtggaaatctgcctcttttggtgtggagggggatgcacggccc
agtgagagcgacggtggagcaagctacaggggtccagtgataagcccagaccgcttcgag
ggccccctctacggccacggggtgcagccgggcccccagcggcccccccgcaggcccaag
ctccagcactcgcagtccatccttcgcaagcaggccgaggaggaggccatcaaacgctcc
cgttcgctctccgagggctatgagctctccgctgacctccaggacaagcaggtggagatg
ctggagcgtaaatatggcggacgcttcataacccggcatgcagcccgcaccatccagaca
gccttccgccagtaccagatgaacaagaactttgagcgtctcaggagttctatgtctgag
aaccgcatgtcccgacgcatcgttttgtccaacatgaggatgcagttctccttcgagggc
cctgagaaagtccacagctcctactttgaggggaaacaggtgtccctgacagacgacggc
acccccctagccttggtacagtctgagtgcggggacctggaggtccaccaccaggccaac
atggcgtctcaccctgcctcccagaacgacctgactgacgccatcacggagctggaggat
gccttctccaggcaggtgaagtctctggccgagtccatcgacgacgccttgaactgtcgc
agccagcagggagacgagggtcttgaccctgaggccatgggctgccccaaggtggagagg
gaggtggcctatcaggtgaagcctcaccgcggggcgacgggacgcatgcgagaggacatg
atggcatcctacagcgatgtgactctgtttatcgatgaggaggagctgtctccctctatg
gggctgtcgcgagggtcagctgaccagccctccagcattgagtcagacctccgcctgcgc
tcagccaactcctcccaagagtactggcccctggaccccaaagacgaggggcgtgacacg
gacaccagctgccgcagcacaccctccctggagtgccaggagcagcggctcagggtggac
cacctccccctgctgaccatcgagccgcccagtgacagctccgccgaacacagtgaccgc
tctgaccgcagctccgtcaaacggccgcccgtctatgagcctcacgggggcagccacatc
gtggcatcctcccaggccagccccaaacacatctctcatggcccacccccgcgggcggcc
tcccgggacgacgaggcgcccctccgccaccgccaccgggcgctggaaagccacctggcc
atcaacggctcggccaatcggcagagcaagtctgagtctgacttctcggacggggataac
gacagcatcaacagcacgtctaactccaacgacactatcaactgcagctctgagtcatcc
agggacagcctaagggagcagacactcagcaagcagacgtaccacaaagagacacgcaac
agctgggactcgccggtcttcagcaacgatgtgatccgcaagaggcactatcgcatcggc
ctgaacctcttcaacaagaagccagagaaaggcgtccagtacctgactgagagagggttc
gtcccggacacacctgtgggtgtggctcacttcctgcttcagaggaagggtctgagcagg
cagatgattggagagttcctgggcaaccgtcagaaacagttcaacagagacgtcctggac
tgtgtggtggatgagatggatttttcgtcaatggagctggacgaggcactgagaaagttc
cagaaccacatccgggtccagggagaggcccagaaggtggagcgcctcatcgaagcctac
agccaacgctactgtatctgtaaccccacggtggtgcgacagttccggaaccctgacacc
atcttcatcctggccttcgccatcatcctcctcaacacagacatgtacagccccaacgtc
aagccagagaggaagatgaagctggaggacttcgtcaagaacctccgaggggtggacgat
ggggaggaaatccccagggagactctggtaggaatatatgaaaggatcaggaagagggag
ctgaagaccaacgaggaccacgtgtctcaggttcagaaggtggagaaactcatagtgggg
aagaaaccgattggatctctccaccatggtataggatgtgtgctgtccctgccccatcgc
aggctagtgtgctactgtcggctgtttgaagtgccagaccccaacaagctccagaagcta
ggcctgcaccagcgggagattttcctgtttaatgaccttctggtggtgacaaagattttc
cagaagaagaagaactctgtgacatacagcttccggcagtctttctctctgtatgggatg
caggttctgatgtttgagaaccagtattacgggaatggaatcaggcttacatcagccata
ccaggtgccgacatcaaagtcctcatcaactttaacgcgcccaacccccaggaccgcaag
aagttcactgacgacctgcgagagtctatcgccgaggtccaggaaatggagaaatacagg
atagagtctgagctggagaagcagaaaggggtggtgaggcccagtatgtcccagagctct
gggctgaagaaggaggctggcaacggcaacatgaaccgtgccagtctggacgacacctac
accatgggcgagggcctgaagaggagcgccctcagcagctccctccgcgacctctccgaa
gcaggcaagcgtgggcgccgcagcagtgcaggatcactagacagcaatatggaagggtcc
atcattagcagccctcacatatgccggagagccacgaccccacgcatcgagggcccgtcc
cggggccaccccaccatccccaactcctcctccctcctcggttcgctctttggcagcaaa
cgggggaagccttcatcccagagccatcctcctcttcctctgcctggtcaccccaccctc
atctcccacacgccccatccgtccaacctccaccacacagcccagcaggtagcccaggct
cagctccaccactcccagtactgccacgtccagcagaacccccctccctaccaccaccat
catcactaccaccccccgccccacacacagtaccaccagcacccggcagcatacgcatcc
tcctcccacacacaccaacacacgcacccccacgctcatgtaccacagcacagccacggc
gcccacagccagcattcccatcacgcttcacactcccagcatgctcctcaccaccacagt
cagcagcagggcccggcacctggcgggcccaaacccaaacacagtggcatcagtaccgtg
gtgtga
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