Coregonus clupeaformis (lake whitefish): 121538593
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Entry
121538593 CDS
T08357
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121538593
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
Serglycin
Motif
Other DBs
NCBI-GeneID:
121538593
NCBI-ProteinID:
XP_041702673
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All DBs
Position
24:complement(45025418..45232044)
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AA seq
1630 aa
AA seq
DB search
MSKVIQKKNHWITKVKECAVSRDARGELNVELRGGAENGEFPYIGEVREDVLVYKNGHLS
EGELLVEVEGLSVSGLPLYDIWTLMKSCKGPIRLKTVRQGNKLNKDLKHYLSLRFQKSSP
DHELQQTIRANLYRHAVPCTTRPLRDGEVPGVDYNFLSVEDFLNLEKSGTLLEIGTYEGN
YYGTPKPPRQPVVGTVILSDAVLLDGPPGSQQSTPKRTKSYNDMQNASVVPADYEDDDQV
TEMNNSFTGSLVRSLFPSPLLCTGNPSDQDECRGGILRPYPARENAPSYGLNNVAASSLD
NGQQTHAQPQASPEDPLGPLPDNWEMAYTENGEVYFIDHNTKTTSWIDPRCLEKPLKPLE
ECEDDEEGVHTEEPDNELELPAGWEKIDDPVYGVYYVDHINRKTQYENPIVEARRRMQLE
PPEGERYIREWIEEHSSAGAPLANYANNHLETYRDPHVPPPLPPAPGGTKRGKPFFTRNP
AELKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVN
DTIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYPLPFDPDDPNTSLVTSVAILDKEPIIV
NGQESYDSPSSHGSQTGGPVNGMREPRAHSPSADVASNGSHGYSSSDVVTLASSIAGQPE
LITVHMEKGDKGFGFTIADSLTGGGQRVKQIVDYPRCRGLKESDILMEVNKRNVQNMSHN
QVVDLLSKCPRGSEVTMLVQRGVVPAKRSPKLVQQLERKDSQSSSQHSVCSHRSTHTDSP
SHPPSNMSSEAMAPPPAAPTQPLPGLPPLPTQDPGDGTMTLQKKPDPFKIWAQSRSMYES
RQPDCQEQEIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELISVD
GTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKSSGYGVSKGEGDVPPSPASSHHSSTQAP
SLTEGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVTAALQPYDVEIQRGENEG
FGFVIVSSVSRPDAGTTLAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILSVNGCSIT
NKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLLTNAEKIATITTTHTPQTATEPRNNSK
SKQAPPPPPPTQAQPSQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLAEDGAAVR
NGKMRVGDEILEINGESTKNMKHARAIELIKNGGRRARLVLKRGDGSVPEYDSSHDRHSP
TPGAQNSPEVRTLPPNSRYHTSSESSYPPDLHKPSRHKDAAQGRDRDRMEHQGRHFNPHH
HHTWNNNHSHTTPSQHYPEISGGNNKKSRGRKVKKSESESGISKLLKTLRKDSSGKKAAA
AAAEKEREWELSASTSTLDRSYGRPRRVSLDRSPTRKQNASPDRRRAKSMDRRAERTHRD
RTPEREYNDRGFLSHAATPERPLYDRRLLREPQTPGRAYMEATTPERPNKGASSLSLSRG
RTPDRGSLKNGNLLRDSSAETREERYGMNGTPERRYRSERDSSPDSSYSREELNYYSTLK
NNASTHNHAGYNNAGHRNNAAAGHSNAVGPNNAVGHNNTVGHNNAVGRAPNQFPEPKRRL
YKESPKDLSI
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtaatccagaagaaaaaccactggatcaccaaagttaaagagtgtgcagtg
agtcgggatgctcgcggtgaattgaatgtggagctgcgcggtggcgcagagaacggagag
tttccctacatcggggaagtcagagaggatgtgttggtttataaaaacggacatctgtcc
gagggggagttactggtggaagttgagggtctctcggtgtctggattacccctctatgac
atctggactctaatgaagagttgcaagggtcccatcaggttgaaaactgtccgacaaggt
aacaagctgaacaaggacttgaagcattacctgagcctgaggtttcagaagtcctctcct
gaccatgagctccaacagaccatcagagctaacctctaccgccatgctgtgccttgtacg
acacgcccccttcgagacggcgaggtccctggggttgattacaactttctgtccgtagag
gacttcctaaaccttgagaagagcggaacactactggaaataggaacatatgaaggtaac
tattatgggacccccaagccaccgaggcagcccgtggttgggacagtgattctcagtgat
gctgtgctcctcgacggccccccaggctcccagcagtccactcccaagcgcaccaagtcc
tacaatgacatgcaaaacgccagtgtagtgccggctgactacgaggatgacgaccaggtt
acggaaatgaacaacagttttacaggatccttagtgcgtagtctcttcccctctcccttg
ttgtgcacaggtaaccctagcgaccaggacgagtgccgcggcggcattctacggccctat
cccgcgcgcgagaatgctccgtcctatggtctgaacaacgtggccgcctccagcttggac
aacgggcagcagacgcacgcccagccccaggcctctcctgaagaccccctgggacccctg
ccagacaactgggagatggcctacacagagaacggagaagtctactttatagaccacaac
acaaagaccacatcgtggatcgaccctcgctgtcttgagaaacctctgaaacctctggag
gagtgtgaggatgatgaagaaggggtacacactgaggaaccagacaatgagctagagctg
cctgcaggatgggagaagatagatgacccagtgtatggggtgtactacgtagatcacatc
aacaggaagacccagtatgagaaccccatagtggaggctaggcgcaggatgcagctggag
cctcctgaaggtgagcggtacattcgagagtggatagaggagcactcctcagctggtgct
cccctggccaactatgccaataaccacctagagacgtaccgcgacccgcacgtcccgccc
ccgctgccccctgcccctggagggaccaaacgagggaagccgttcttcacacggaaccca
gcggagctgaagggaaccttcattaacaccaaactgaagaagagccgccgcgggttcggc
ttcaccgtagttgggggcgacgagccggatgagttcctgcagatcaagagtctagtcctg
gacggtcctgctgctttggatgggaagatggaaacaggtgacgtgatagtgagcgtgaac
gacaccatcgttctgggttacacccacgcccaggtggtgaagatcttccagtccatcccg
atcggctccatggtggacctggccctgtgccgtggctaccccctgccctttgaccctgac
gaccccaacaccagcctggtgacctccgtggccatcctggacaaggagcccatcatcgtc
aatggccaggagagctacgactctccgtccagccacggcagccagaccggagggcccgtt
aacgggatgagggagccacgggcccacagtccctcagcggatgtggcgtccaacggctct
cacggctactcctccagcgacgtggtcaccctggcgtcatccatcgccgggcagccagag
ctgatcacggtgcacatggagaaaggcgataagggctttgggttcaccatcgctgacagc
ctgacgggtgggggtcagagggtgaagcagatcgtggactacccccgctgcaggggcctg
aaggagtcagacattctgatggaggtgaacaagaggaacgtccagaacatgagccacaac
caggtggtggacctgctcagcaagtgtcccagagggagcgaggtcaccatgctggtgcaa
agaggagtggtgccggccaagaggagccccaagctggtgcagcagctggagaggaaggac
agtcagagcagctcccagcacagtgtgtgcagccatcgcagcacccacacagactctccc
agccaccccccctccaacatgtccagtgaggccatggccccccctccggccgcacccact
cagccgctgcctggcctgcctcccctgcccacccaggaccctggagatggcaccatgacc
ctccagaagaagccagaccccttcaagatctgggcccagtccaggagcatgtatgagagc
agacagccagattgccaggagcaggagatcttcctgtggcggaaggatacaggttttggg
ttccgcattctgggaggaaatgagcccggggagccaatctacattggccacatagtgaag
tatggtgcagcagatgaggacgggcgcctgcgttcgggggacgagctcatctctgttgat
ggcacggcggtggtggggaagtctcaccagctggtggtgcagctgatgcagcaggccgcc
aagcagggccacgtcaacctcaccgtccgacgcaagagctctggatacggagtttcaaaa
ggggagggtgacgtgcccccgtcccctgcctcgtcccaccacagcagcacccaggcaccc
tccctgacggagggcaagcggaccccccagggcagccagaactccctcaacacggtcagc
tccggcagtggctccaccagtggcatcggtagtgggggaggaggtggctccggcagtgct
gtggtcaccgcagccctgcagccctatgacgtggagatccaacgtggagagaatgagggc
ttcggattcgtcattgtgtcgtctgtctctaggcctgatgctgggactactttggctgga
aatgcatgtgtggccatgccccacaaaatagggcgcatcatcgaggggagccctgcggac
cgctgtgggaagctgaaggtgggcgaccgcatcttgtccgtcaacggctgctccattacc
aacaagtcccactcggacatcgtcaacctgatcaaggaggccgggaacacagtctctctg
aggatcattcctggtgacgagtcctccaacgcatctctgttgaccaacgctgagaagatt
gccaccatcaccaccacgcacacaccccaaactgccacggagcctcggaacaactcaaag
tcgaaacaggctcctcctccacctcctccaacacaagctcagccctcacaggatgccgag
ttctactctgtggatctggagcgggacagtaaaggttttgggttcagcctgaggggagga
cgggaatataacatggacctatatgtgttgagactggctgaggatggggcagctgtcagg
aatggcaagatgagggtgggagatgaaatcctggagatcaacggcgagagtacaaagaac
atgaagcacgcacgcgccatcgagctgatcaagaatggtggccggagggcacgcctggtc
ctcaagaggggcgatggatctgtacctgaatatgactccagccatgacaggcactctccc
acacccggggcacaaaactctccggaagtgagaaccctgccaccaaacagccgttatcac
acctcatcggagtccagttatccaccagaccttcacaaaccatcacgccacaaggatgct
gcgcagggccgagacagggacaggatggagcaccagggccggcactttaacccccaccac
catcacacctggaacaacaaccacagccacaccacccccagccaacactaccctgaaatc
agcggcggcaacaataagaagagccggggccgcaaagtcaagaagtcagagtcagagagc
ggcatctcaaaactcttaaagactctgcgtaaggacagctctgggaagaaggctgctgct
gcagcagcggagaaagaacgagagtgggagctctccgccagtaccagtactctagaccgg
agttacggtcgaccacgccgcgtctccctcgaccgctcgcccacccgtaaacagaacgcc
tcccctgaccgacggcgggccaagtccatggaccgcagggcggagcgaacacaccgagac
cgcacacccgagagggagtacaatgacagagggttcctcagtcatgcggctactcctgaa
cgaccactctatgaccgcaggctcctgagggaaccgcagaccccgggccgagcctacatg
gaggccaccaccccagagcgcccgaacaaaggggcttcctccctgtctctctccaggggg
cgcactcccgacagaggcagcctgaagaacggcaacctcctgagggactcgtcggctgag
acaagggaggagaggtacgggatgaacggaacaccagagagacgctacaggtcagagaga
gactcgtctccagacagcagctatagcagggaggagctgaactactacagcacactgaag
aacaatgcctccactcacaaccacgccggctacaacaacgcaggacaccgcaacaacgca
gcagcaggacacagcaatgcagtaggaccaaacaacgcagtaggacacaacaacacagta
ggacacaacaacgcagtaggtcgcgccccgaaccagttccccgagcctaagagaaggctt
tacaaagagagccccaaggacctcagcatctga
DBGET
integrated database retrieval system
