Coregonus clupeaformis (lake whitefish): 121538605
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Entry
121538605 CDS
T08357
Name
(RefSeq) glutamate receptor-interacting protein 2 isoform X1
KO
K20251
glutamate receptor-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121538605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121538605
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Others
Glutamate receptor-interacting proteins (GRIPs)
121538605
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
121538605
NCBI-ProteinID:
XP_041702705
LinkDB
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Position
24:complement(45987433..46034979)
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AA seq
1131 aa
AA seq
DB search
MNMSGRVIYGKGRMANPKLITLASQTESMRKGGARGGKRRMFSFSLRCRLGVIRGRTKDD
GPYSKGSKDSGGTDHSLTSRRRSIAEDYRGVTTVDLIKREGSSLGLTISGGSDKDGKPRV
SNLRPGGLAARSDQLNVGDHIKSVNGINLSKLRHDEIISLLKNIGERVVLEVEFELPPFG
SSTSIQNTPSGVIAKTIEVCLYKEGNSFGFVMRGGFHEDWHRSRPLVVTYVRPGGPADRE
GTLKAGDRVLSIDGMPLNREKHADALTMLMQSSQEALFLIEYDVSLMESVQQASGPLLVE
IMKCPAASLGVSLATAVYRNKQVIVIDKIKQASVVERCGALHIGDLILSIDGTSTEHCSL
MEATQLLAQTSDVVKLEILPANQSRLPMRPQDTVKVQKSNLHHWDPTANYSHTQHCKTWS
SPSHQLNQQDHCKSLVCGGFSPSSTATSGYSSNQGSQGSSTLPCPIPPVAPTSPRSTTHK
RRQRRKEHKSSLSLTSSSVGPGGQVVHVETSEVILRGDPLLGFGVQLQGGVFATETLSAP
PVIRFIEPDSPAERCGLLHVGDRLLFINRIPTEDGTLEEANQLLRNAALANKVTLEVEFD
VAESVVPSSGTFHVKLPKRKGVELGITISASKRPDKPLIISDIRKGSIAHRTGTLEPGDR
LLAIDNVRLENCTMEDAMHVLQQAEDMVKLRIQKDEDNADELEMSGSIIYTVELKRYNGP
LGITISGTEEPFDPIVISGLTKKGLAERTGAIHIGDRVLAINCVSLKGKPLSEAIHLLQM
AGETVTLKIKKRQDESEGQQTSEQAGFLSDTEDELTDSQKTSKHSGVYSTTGPSVDSAIS
SWDCSGSQGTYLHRSADLTFQPNEWRRTKPPRTHLTSTGLTGLTHHSHLYDGRYTEDDWD
KAAGYASPPRCHGTLNQEDSFWSQALQDLETCGQSEILRELEASMTGSTLSLYLEETKSQ
EDSMLQSRISPVKRGPIHNELKTKGNLQRSNRTRDTPPRGRVEAQETTSPTALELLKVTL
RKDPDCGDFGFSVSDGLLEKGIYVNMIRPDGPANQAGLKPYDRILQVNRARTRDFDCCLT
VPLITEAGDSLVLVISRNSLAQADNGPPLDCEDPSDSLFSFLHYSTNSIAL
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtcaggcagagtgatatatggaaagggacgcatggccaacccaaagcttatc
accctggcctctcagacagagtccatgaggaaaggaggagcgcgaggaggaaagaggagg
atgttctccttttcactccggtgtcggctcggggtcatcagagggaggaccaaagatgac
gggccctactctaagggcagcaaggactctggagggaccgaccattcccttacctccagg
agacgcagtattgcagaggactaccggggtgtgaccacggtggacctgataaaaagggag
ggcagcagcctgggcctcaccatctccggggggtccgataaggacggcaagcccagagtg
tcaaacctgcggccaggtgggctagctgccaggagtgaccagctgaatgtgggagaccac
atcaagtcagtgaacggcatcaacctgtccaagctccgccacgatgagatcatcagcctg
ctgaagaacataggggagcgtgtggtgctggaagtggagttcgaactacctccctttggt
tcgagcacttctatccagaacactccctcaggtgtcatagctaagaccatagaggtgtgc
ctatacaaggagggcaacagctttggattcgtcatgagaggagggttccatgaagactgg
cacaggtctcgtcctctggtagtgacctacgtacggcccggggggccagctgacagagag
ggaacactgaaggctggtgaccgcgtgctgagcatagatgggatgcccttaaaccgagag
aagcacgctgacgccctgactatgctgatgcagagtagccaggaagccctgttcctgatt
gagtatgatgtctccctcatggagtcagtccagcaggcctctggccccctactggtggag
ataatgaagtgtcctgcagccagtctgggtgtcagcctggctactgctgtgtacaggaac
aaacaggtcatcgtcatcgacaagataaaacaagccagtgtggtggaaaggtgtggggca
ttgcatataggtgatctcatcctgtctatagatgggaccagcactgagcactgttccctg
atggaggccacgcagctattggcccaaacctctgacgttgtcaaattggagatcctccca
gccaatcagagcagacttcccatgagaccccaagacacagtgaaagtgcagaaaagcaac
cttcaccattgggaccccactgccaactacagccacacccaacactgcaagacatggagc
agtcccagccaccagctcaaccagcaggaccactgcaaatctctggtgtgtggtggcttc
tccccttcctctacagccacctcagggtacagcagcaaccagggcagtcagggcagcagc
accctgccctgcccaatcccccccgtcgcccccacaagcccccgcagcactacacacaag
agacgccagcggagaaaggagcacaagagctcactgtccctaacatccagctcagtgggc
cctgggggtcaggttgttcacgtggagaccagcgaggtcatcctgaggggggatccactc
ctagggttcggggttcagctgcaggggggtgtctttgccacagagaccctgtccgctcct
ccagtcatccgcttcattgagcccgacagccctgccgaaagatgtgggcttctgcatgtg
ggggacagactcctgttcatcaacagaatccctacagaggatggaacactggaggaagcc
aatcaactgctgcgaaatgccgctttggccaataaggtcaccttggaggtcgagtttgat
gtagcagaatcagtggttccaagtagtggcacattccatgtgaaactgcccaagaggaaa
ggagtggaacttggcatcaccatcagtgcaagcaagagacccgacaaacctctcatcatc
tctgacatcagaaaaggaagcatagcccacaggacaggcaccttggagccaggggacagg
ctgctggccatcgataacgtgcgtctggagaactgcaccatggaggacgccatgcacgtg
ctgcagcaggcagaggacatggtcaagctccggatccagaaggacgaggataacgctgat
gagctggagatgtctggttccattatctacacggtggagctgaagcgttacaacggcccg
ctgggtatcaccatctcaggcacagaggagccctttgaccccatcgtcatctcaggcctc
accaagaagggcttggccgaaaggactggtgccatccatataggggaccgtgtcctggcc
atcaattgtgtgagtctgaaggggaaacccctgagcgaggccatccatctactccaaatg
gccggagagactgtcaccctcaagatcaagaaacgccaagacgaatcggaagggcagcag
acgtcggagcaggcagggttcctgagcgacacagaggatgagctgactgactcccagaag
accagtaaacactcaggggtgtactctaccaccgggcccagcgtggactctgccataagc
tcctgggactgttccggcagccaaggaacgtatctccacagatctgcggatttgaccttc
cagcctaacgagtggagacgcaccaaaccgcccaggactcacctcacctccactggcctt
accggccttacccaccactcccacctctacgatgggagatacactgaggatgactgggat
aaggctgctggatatgccagcccccctcgttgccatggcaccctgaaccaggaggacagc
ttctggtcccaggccctgcaggacctagagacctgcggccaatcagagatactcagggag
ctggaggcgtccatgacaggcagcactcttagcctgtatctggaggagaccaagtcccag
gaagactcaatgctacagagcagaatcagtcctgtgaagaggggtcccatccataacgag
ctcaagaccaaaggcaacctgcagaggtccaacaggaccagggacacaccccccagaggg
agagtagaggcccaggagaccacttcccctacagccctggaactactgaaggtgacactg
aggaaggacccagactgtggagactttggcttcagtgtgtcagacggcctcctggagaaa
ggcatctatgtcaacatgatccgaccagatggccctgccaaccaggccgggttgaaaccc
tacgaccgcattctgcaggtgaacagagcaaggaccagagactttgactgctgcctgacc
gttcctctcatcactgaagcaggagacagcttggtcctggtcatcagcagaaactccctg
gcacaggcagataatgggccacctctggactgtgaggacccctctgactccctgttcagc
ttcctacattacagtaccaatagtatcgccctgtga
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