Coregonus clupeaformis (lake whitefish): 121538647
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Entry
121538647 CDS
T08357
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121538647
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121538647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121538647
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121538647
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Claudin_2
Motif
Other DBs
NCBI-GeneID:
121538647
NCBI-ProteinID:
XP_041702777
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Position
24:61512272..61528096
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AA seq
460 aa
AA seq
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MIYLKGHTLLVGILVVLTGSARCSEDETRLVKTLFTGYNKVVRPVNHFKDPVVVTVGLQL
IQLISVDEVNQIVTSNVRLKQIWEDVNLKWNPDDYNGIKKIRIPSTDIWRPDLVLYNNAD
GDFAIVHETKVLLEHTGMITWTPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVV
VNPDNDRPDLSNFMESGEWVMKDYRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVN
VIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKY
MLFTMVFVIASIVITVIVINTHHRSPSTHTMPQWVRKIFIDTIPNFMFFSTMNRPSRDRQ
EKRILLADFDISDISGKPAPASVTFQSPITKNSDVRSAIEGVKYIAETMKSDEESNNAAE
EWKFVAMVLDHILLCVFMAVCIIGTMGVFAGRLIELSMQG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatttatttgaagggacacactcttcttgttgggattctggttgttttaacaggttca
gccaggtgttcagaagatgagactcgtctggttaaaaccctgttcaccggctataacaag
gtggtccgccctgtcaatcacttcaaagatccagtggtggtgactgtaggcttgcagctc
atccagctcattagtgtggatgaagtcaatcaaattgtgaccagcaatgtgcggctgaaa
cagatatgggaggacgtgaatctgaagtggaaccctgatgattataatggaattaagaag
atcagaatcccttccacagacatctggcgtcctgacctcgtactctataacaatgcagat
ggagactttgccatcgtccatgagaccaaggtgctgctggagcacacaggtatgatcacc
tggacccctccggccatctttaagagctactgtgagatcatcgtgcttcacttccccttc
gacctgcagaactgcagtatgaagttggggacatggacctacgacggcaacctggtagtg
gtcaacccggacaacgaccggcctgacctgagtaacttcatggagagtggtgagtgggtc
atgaaggactataggagctggaaacactgggtgtactacgcctgctgccctgacacgccc
tacctggatatcacctaccacttcctgatgctgaggctgcctctctacttcatcgtcaac
gtcatcatcccctgcatgctgttctccttcctgactggactggtcttctacctccccact
gactctggtgagaagatgaccctgtctatctccgtcctgctgtccctcactgtgtttctg
ctggtcatcgtggagctcatcccctccacctccagtgcagtgcctctcattgggaagtac
atgctcttcaccatggtcttcgtcatagcctccatcgtcatcaccgtcatcgtcatcaac
acacaccaccgctctcccagtacacacaccatgccccagtgggtccgcaagattttcatc
gacaccatccccaatttcatgttcttctcgactatgaaccgtccgtccagggacaggcag
gagaagaggatcctcctggcagactttgacatttccgacatttcgggcaagcctgcccct
gcctcggtcaccttccagtcccccatcaccaagaactcggacgtccgcagcgccattgag
ggggtcaagtacatcgcagagaccatgaagtctgatgaagagtccaacaatgctgctgag
gagtggaagtttgtagccatggtcctggatcacatcttgctgtgtgtgttcatggctgtg
tgtatcatcggcaccatgggagtgttcgctggacgtctcatcgagctgagcatgcagggc
taa
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