Coregonus clupeaformis (lake whitefish): 121538775
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Entry
121538775 CDS
T08357
Name
(RefSeq) thyroid transcription factor 1 isoform X1
KO
K09344
homeobox protein Nkx-2.4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121538775
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121538775
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121538775
NCBI-ProteinID:
XP_041702871
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All DBs
Position
25:complement(16265987..16270550)
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AA seq
351 aa
AA seq
DB search
MSLSPKHTTPFSVTDILSPIEETYKKFSGMDGSGNLTSPLGAYRQPQVSQTGMQQHSMGH
NASVATTYHMPHTVSQFSHSAMGGYCNGSIGNMGDLPSYQETMRNNAAATGWYGANTDPR
YSTISRFMGPSTGMNMTGMGNLTGMGDASKSMPPLHAAPRRKRRVLFSQAQVYELERRFK
QQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQLLQQDSNLCQQQQSP
RRVAVPVLVKDGKPCQNGSNTPTPNQQQVQQQQQQQQQQNGSGVVLPASSNAINQHQNHQ
VNSLVQAQDLEEMSPSPPSLHSQINMAQIDTSVIDYTNNMVSSNLLYGRTW
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgagcccaaagcatacaacgcctttttcagtgactgatattttgagtcctatc
gaggagacctacaagaagtttagtggaatggacggctcagggaacctaacctctccactg
ggagcttaccgacagcctcaggtgtcccagactggcatgcaacagcactccatgggccac
aacgccagcgtggcgaccacctaccacatgccacacactgtctcccagttctcgcacagc
gccatgggtgggtactgcaatgggagcattggcaacatgggagaccttccgtcgtaccag
gaaaccatgagaaataacgcagcagccacagggtggtatggcgcgaacacggatccaaga
tattcaacaatttctagattcatgggaccttccacaggtatgaacatgactggaatgggg
aacctaacaggcatgggggacgcctccaagtccatgccacccctgcacgcagcgcccagg
aggaaacgacgggtactcttctcccaggctcaggtgtacgagctagagaggagattcaaa
caacagaaatacctctcagcgccagagcgggaacacctggccagtatgatccacctgacg
ccgacccaggtcaagatctggttccagaaccacaggtacaagatgaagcggcaggccaag
gacaaagcggcgcagctgctgcagcaggacagcaacctgtgtcaacaacaacagtctccg
aggcgcgtggccgtgcctgttctggtgaaggacggtaaaccatgtcagaacggctccaac
acaccaacgccgaaccagcagcaggtacagcagcaacaacaacagcagcagcaacagaac
ggctctggggttgtgctccccgcttccagtaatgccatcaatcaacaccaaaaccatcag
gtcaactccttagttcaggcccaagacctggaggagatgtcacctagccctccttcactc
cacagtcagatcaacatggcgcaaatagacacttctgttatagactacactaataacatg
gtcagctccaacctactctacggcagaacttggtag
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