Coregonus clupeaformis (lake whitefish): 121538839
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Entry
121538839 CDS
T08357
Name
(RefSeq) cannabinoid receptor type 1A-like
KO
K04277
cannabinoid receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121538839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121538839
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Others
Cannabinoid
121538839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121538839
NCBI-ProteinID:
XP_041702944
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MKSALDGIADTTFRTMTTGLQYLGSNDVSYDDTSIDSGFAKTGFHLQKTHSAPLSNSFPG
QVPGDKELIYNGNSIYPTNFSEMLGNGTRWEGGGSIQCGENIVDMECFMILTPSQQLVVA
VMALTLGTFTVLENLIVLCVILHSHTLRCRPSYHFIGSLAVADLLGSVIFVYSFLDFHVL
HRKDSPNVFLFKLSGVIASFTASVGSLFLTAIDRYISIHRPMAYKQIVTKNKAVIAFCMM
WTISIVIAILPLLGWNCKQLNSVCSDIFPLIDEKYLMFWIGMTSVLLLFIIYAYMFILWK
AHHHTVRMMSRSSQKSIIVYMADGTKVQTMRPEQARMDIRLAKTLVLILVVLIICWGPVL
AIMVYDLFWKMNNFIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRRGFLNICQTCRGTSQ
PLDNSAESDCHSRSVKGTATAYKSSASYANTTVKEAKVNLSVSAEAV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgctctggatggtatagctgacaccactttccgaacaatgactactggtttg
cagtatcttggctccaacgatgtgagctatgatgacacgtccattgattctggcttcgcc
aagactggattccacttacagaagactcactctgccccacttagtaactccttccctgga
caagtacctggggacaaggagctcatctataatggcaactccatttacccgaccaacttc
tctgaaatgcttggcaatgggacccgatgggagggcgggggttctatccaatgcggggag
aacattgtggacatggagtgcttcatgattctgacccccagccagcagttagtagtagcg
gtcatggcactcaccctgggaaccttcacagtgctggagaaccttatcgtattgtgtgtg
atcctccactcccacaccctgcgctgtcggccctcataccacttcataggaagcctggct
gtagccgaccttctgggcagtgtcatatttgtgtacagtttcttggacttccatgtactg
caccggaaggacagccccaatgtgtttctatttaaactcagtggagtcatcgcctctttc
actgcctctgtgggcagtctctttctcacggccatagaccgctatatctccatacacagg
ccgatggcttacaagcagatcgtcaccaagaacaaggctgtcattgccttctgcatgatg
tggactatctccatcgtcattgcgattctccccctactgggctggaactgtaaacaactg
aactcggtgtgctcagacattttcccgctcatcgacgagaagtacctgatgttctggata
gggatgaccagtgtactgcttctattcatcatctacgcctacatgttcatcctgtggaag
gcccaccaccacactgtgcgcatgatgagccgcagctcccagaagagcatcattgtctac
atggcagacggtaccaaggtgcagaccatgcgtcctgagcaggcccgtatggacatccgc
ctggccaagaccttggtgctaatcctggtggtcctcatcatctgctggggccctgtgcta
gccatcatggtctacgacctcttctggaagatgaacaacttcatcaagacggtctttgcc
ttctgcagcatgctctgcctgctcaactccaccgtcaaccccataatctatgcactgagg
agtaaggacctgcgccggggcttccttaacatctgccagacgtgcaggggaacttctcaa
ccactggacaacagcgctgagtccgattgccatagcaggagcgtcaaaggcacagccaca
gcctacaaatcctcggctagctatgcaaacaccactgtaaaagaggccaaagtcaacctg
tcggtctccgcagaggcggtctga
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