Coregonus clupeaformis (lake whitefish): 121538928
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Entry
121538928 CDS
T08357
Name
(RefSeq) ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121538928
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121538928
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_3
RA_2
Motif
Other DBs
NCBI-GeneID:
121538928
NCBI-ProteinID:
XP_045079485
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Position
11:complement(37903929..37943880)
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AA seq
1229 aa
AA seq
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MTPPTLPSKPSSPPVSPPPPVSPADPTPSPSSSTTPLLSASEPLPPQIDLAIDVTDTTDV
PHATVPEDCTPPLPKPLAPDVPKASTSPLPTPVPPQVSVPSTLPFPDILDASSVPELSSS
EPTVPALSSHPVPKPSSMPLSAPISKPSLSPFSSPPVPPVSKLSSPPLSRPSAPRKLSGP
SQPRPPVPHPHSIAKPSSPALPRPPLPSTKPSSPPLPTPLVPLAPKPSPAPASSPAPAPA
PTPATAPPPSISILEKLIKTCPVWLQLAMAQEKSSLILKKETPGIFLVRKSPDQKAMVLS
VRISNQQGEPQVQDVLVKEEKSLIYLEGSVLVFDNIFKLISFYCVSRDILPFTLRLPEVI
VQATKYEDIEMISTLGSDFWVSQMNSSSEEPGQGSRPVGHGQGQGHSSSCEIQLSTGTGN
DRLWYVNPIFIEEYCSSLEASTPVAAPILRSQSLNTPGSGQGQVPPKFKRPPPRPPNVPE
GLLLSQGAKQGNRGTSDSPSPRSPPPPLRVTAKPGQKGEGNSSKGSGEGEKAASQLVSER
EVSVTATDPVAATQPLQHLSPHGATAGHRHPAPRPPPHRIPLVPLRRMPSEKRPPPPGQE
PPQPDGGTLTLTTPSKKKDEGSVGIVPVASLVCIDVTTNMADEEKELRVEPYAGEIETLQ
RQGTSETSNSSEAVTVAIPAPLTKRAAPPVPPPRKNKPSQATLTTPLAPDMIGGGLLSIN
ASLDIPQTSSTPLPARMAISIPEGEVREARGADVSLYAPDGGAALPALDHDSYSTSSTEE
EADTVASRAGGAVGTNNTKVSMKRTPTIMLDRAKQRLSMVNFSSVFTNFMSADHKLQKRI
VELSRDGSSYFGNLVKDYRVYILETMVKHSSSTELLQEIRQMMTQLKSYLIQSTELQNLL
EPNVYTEEKLEVIMEAALCKAVLKPLREAVYSGLKDIHARGGCLKRLRENQSVVLGTTTT
DLGVTTSVPETTVMEKIQLKLMTLHLEYSPQKKIDLLLKTCKIIYESMSIGCPGRAHGVD
DFLPVLMYVLARSNMAFLLLDVEYMMELMDPALQLGEGSYYLTTTYGALEHIKNYDKQAV
TQQLSLEIQDSIHRWEKRRTLNKARLSCSSVQDFINVSFLEAGSNTKTLGVHPTTTAQDL
CAQCADKFEVLEPESYSLSVLVEGHYQPLAPEEFPLTIKSSLHHSEPRKAFYFVYRPGRT
ESEGQEAESEETATAAEPEPDEENNLIEI
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgactcccccgactctcccctctaaaccctcctctccccctgtctcacccccaccccct
gtctcacccgctgaccccactccctcaccctcctcatccacaacaccccttctttcagca
tctgaaccgctccctcctcaaattgacttggccattgacgtcactgacaccactgatgtc
cctcatgccactgtcccagaggactgtactcccccactccccaaacccctagcacctgat
gtcccaaaggcatccacttcccccctccccacacctgtaccacctcaagtctcagtgccc
tctacactcccctttcctgatatcttggatgcctcttcagtcccagagctctcctcttca
gagccaaccgtaccagcactttcctctcacccagtcccaaagccctcatctatgcccctc
tctgctcccatctcaaaaccctccttatctccattctcctctccccctgttcctcctgtc
tcaaagctctcctcaccccctctttctagaccctcagcacctcgaaaactctccggtccg
tcccagccgagaccccctgttcctcaccctcactcgatagccaagccctcctcccctgct
ctccccagaccccctcttccatctaccaagccctcgtctccccctctccccaccccacta
gtccctcttgcacccaagccctccccagccccagcctcctcaccagccccagccccagcc
ccaaccccagccacagctccaccacctagcatcagtatcctggagaagctgatcaaaacg
tgccctgtctggttgcagttagccatggcccaggagaaatcctcacttatactgaagaaa
gaaactcctggaatctttttagtgcgtaaaagcccagaccagaaggccatggttctgtca
gtacgtatttctaaccagcagggggagcctcaggtccaggacgttctggttaaagaagag
aagtcattgatctacctggaagggtctgtcctggtctttgacaacatcttcaaactcatc
tccttctactgtgtcagccgggatattctccccttcactctgaggttgcctgaggtcatc
gtccaggcaaccaagtatgaagatatagagatgatatcaacattaggttcagatttctgg
gtctctcagatgaacagttcctctgaggagccaggacaagggagcagaccagtagggcac
ggccagggccagggtcacagctcgtcctgtgagatccagctgtccactgggaccggtaac
gaccggctgtggtacgttaaccccatattcatagaggagtactgcagcagcctggaggcc
tccacccccgtcgctgctcccatcctcaggagccagagcctgaacaccccaggctcaggg
caggggcaggtaccccccaagttcaaacgccccccaccccgaccccctaatgtccctgag
ggattgttactgtcacagggggccaagcaggggaacagagggacgtctgattccccctcc
ccccgctcaccacccccacctcttagagtcacagccaagccagggcagaaaggagaagga
aacagcagcaaaggcagtggggagggagagaaagctgcttctcaacttgtctcagagaga
gaggtgtcagttacagctactgacccagtagcagctactcagcctctacagcatctgtca
ccgcatggagcaacagcaggacatcggcacccagcaccccggccacctccacacaggatc
ccacttgtgcccctacggcggatgccctcagagaagcgtcccccacccccaggacaggag
ccgccccagccggatgggggcaccctgaccctcaccacaccctcaaagaagaaggatgag
ggcagtgttggcatagtgcctgttgcttcactggtgtgcatcgacgtcaccaccaacatg
gcagacgaggagaaggagttaagagtggagccctatgctggtgagatagagacactgcag
aggcaagggacatcagagacttcaaacagcagtgaggctgttaccgtggctataccagcc
cctctgacgaagagggccgcaccgccagtcccacctcccagaaagaataagccctcccag
gccacgctcactacacctctcgccccagacatgataggtggaggacttctttcaatcaat
gcatcattggacatcccccagacctctagcacccccttgccagcccggatggccatttcc
atccccgagggggaggtgagggaggccagaggggcagatgtgtccctgtatgctcctgat
ggtggcgcggccctccctgcactggaccatgactcttactctaccagcagcacagaggag
gaggctgacactgtggccagtcgggctggaggggccgttgggaccaacaataccaaagtg
tcaatgaagaggacccctaccatcatgctagaccgggccaagcaacgcctctccatggtc
aacttctccagtgtgttcaccaacttcatgagcgctgaccataagttgcagaagaggatc
gtggagctgtcccgggacggtagctcctacttcgggaacctggtgaaggattacagggtg
tatattctggagaccatggtgaagcacagctccagcactgagctgctgcaggagatcagg
cagatgatgacccagctgaagagttacctcatccagagcactgagctgcagaacctcctg
gagcccaacgtctacacagaggaaaaactagaggtgattatggaagctgctctgtgcaag
gctgtgctgaagcctctgcgggaggctgtctactccggcctgaaggacatccatgccagg
gggggctgtctgaagagactgagggagaaccagagtgtggtcctgggtaccaccaccaca
gatctgggggtcaccaccagtgttccagagaccactgtcatggagaagatccagctgaag
ctgatgaccctccacttggagtactcccctcagaagaagattgatctgctcctcaagacc
tgcaagatcatatatgagtccatgtctataggctgcccagggagagcccatggcgtagat
gacttcctcccagtgctgatgtacgtcctggccaggagcaacatggccttcctgctactg
gatgtagagtacatgatggagctgatggaccctgcactacagctaggagaaggctcctac
tacctgacgaccacgtatggagcgttggagcacataaagaactatgacaagcaggcggtg
acacagcagctcagtctggagatccaggattctatccaccgctgggagaagagacgcacc
ctgaacaaggcccggctgtcatgctcgtctgtacaggacttcatcaacgtgtcgttcctg
gaggcggggtctaacactaagaccctgggagtccaccccaccaccacggcccaggatctg
tgtgcccagtgtgctgacaagtttgaagtgctggagccagagtcctacagcctgagtgtg
ctagtggagggccactaccagcccctggcccctgaggagttccccctcaccatcaagtct
agtctccaccacagtgagccccgcaaggccttctactttgtctaccggcctggaaggaca
gagtcagaagggcaggaggcagagagtgaggagacagctaccgcagcggagccagagcct
gacgaggagaataatctgatcgagatatga
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integrated database retrieval system