Coregonus clupeaformis (lake whitefish): 121538978
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Entry
121538978 CDS
T08357
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121538978
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121538978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121538978
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Others
Platelet activating factor
121538978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121538978
NCBI-ProteinID:
XP_045068272
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MGMPEDLAVSRKVNLTTVGKTTFLDSEFRYTLFPVFYGVVFVLGLIANSYVLFVLRRMRN
AKAMNEIRIYMANLTVADLLFVCALPFWIGYYHCSGDWRYGDFLCRVTGVFFFINTYCSI
LFLAAISVNRYWAITRPLDAASSDRWRRGVAVTMVIWTLTLSMSVPHLLKTGIQVDERNV
SRCFEGFHHNTDDEKRTVATIHLIIVGCFVLVFFVVVVCNLLISRALLAQSPIQTRGSSS
YMPRGVKGQALQMLCAVVGVFVVCFLPHHVVQGPWTLAVLEIKEGWGSMDWDQRTRQWLN
DAHQVTLMLMGLNCLLDPVVYCFATRKFRLYIKDHLKKLGRGKGCSETAITQISMVECKI
MSQRLHSEQQQLQI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggggatgccagaggacttagcagtgtccaggaaagtgaacttaacgacagtcggtaaa
acaacctttctggactcggagttccgctacacactcttcccagtgttctacggtgttgtg
tttgtccttgggctgatagccaacagttacgtgctgttcgtgctgcggcgcatgcgcaat
gccaaggccatgaacgagatccgcatctacatggccaacctgactgtggccgacctcctc
ttcgtgtgcgccctccccttctggattggctactaccactgcagcggcgactggcgctac
ggcgacttcctgtgccgtgtcaccggcgtgttcttcttcatcaacacctactgctccatc
ctcttcctcgccgccatcagcgtcaaccgttactgggccatcacgcgcccgcttgatgcc
gcctcgtccgaccgttggcgccgcggagtggctgtcaccatggttatctggacgctcact
ctgtccatgtccgtgccgcacctcttgaagacgggcatccaggtggatgagcgcaacgtg
tcgcgctgcttcgagggcttccaccacaacactgacgacgaaaagcgtacagtggccacc
atccacctcatcatcgtggggtgcttcgtcttggtcttcttcgtagtagtagtctgtaac
ctgctcatatcccgggccctgctcgcccagtcccctatccagactcggggctctagttca
tacatgccccggggggtgaagggccaggccctgcagatgctgtgtgccgtggtgggggtg
tttgtggtgtgcttcctcccccaccatgtggtccagggcccctggactctggctgtactg
gagatcaaggagggctggggcagcatggactgggaccagcggaccaggcagtggcttaac
gacgcccaccaggtcaccttaatgctgatggggctcaactgcctcctggaccctgtggtt
tactgcttcgccaccaggaagttccgcctgtacatcaaggaccatctgaaaaagttgggg
aggggcaaaggatgctcggaaacagccatcacacagatttctatggtggagtgcaagatt
atgagccagcggctccatagcgagcagcagcagctccagatttaa
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