Coregonus clupeaformis (lake whitefish): 121538981
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Entry
121538981 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121538981
04082 Neuroactive ligand signaling
121538981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121538981
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121538981
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121538981
NCBI-ProteinID:
XP_041703080
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Position
3:complement(2415894..2505737)
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AA seq
537 aa
AA seq
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MGKLRKNHFGILTFSFFFTFICCAQSAKDLRDPSNMPLVKDTVDRLMKGYDIRLRPDFGG
APVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIALNLTLDNRVADSLWV
PDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLE
IESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSIVDYKLVSKNVVFSTGSYPRLSLSFK
LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKRAAEKLAVANNEKLRPDP
NKWMVGNVVQRDDALYARMKQREIDAYDTMWDPIFVDDAALGLGEQRNKMTASLTDDNIL
FGSLEMKNEMGGVPPELSRSLGAGGLGDPRNTMLAYDSSTLQYRRAAMARQNYGGGPHSA
LERHATQKKSRLRRRASQLKVNIPDLADVNSIDKWSRMIFPTVFSFFNVVYWLYYAH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctcaggaaaaaccactttggaattttgacattttcgttcttttttactttt
atctgctgtgcgcaaagcgccaaagatctgagggatcccagtaatatgccgctggttaaa
gacacggtggacagactgatgaaaggctacgacattcggttgaggccagatttcggaggt
gcgccggtggcagtggggatgaatatagacatcgccagcatagacatggtgtctgaagtc
aatatggactacacgttgaccatgtacttccagcaggcctggcgggacaagcgtctgtcc
tactctgagatagccctcaacctgacgctggataacagggtagccgactcgctctgggtt
cccgacacctacttcctcaacgataaaaagtccttcgtccacggcgtcacggtcaagaac
agaatgatccgactgcacccggacggcaccgtgctctacggactgcggatcaccaccaca
gcagcctgtatgatggatctgaggcggtaccctctggatgaacagaactgcacactggag
atcgagagctatggctacaccactgatgacattgagttctactggcgagggggagatgga
gctgtgtctggggtggagagaatagagctgcctcagttctccatcgtggactacaaactg
gtctccaagaacgtggtcttctccacaggttcctacccccgcctgtctctgagcttcaag
ctgaagaggaacatcggctactttatcctccagacctacatgccctctatcctgatcacc
atcctgtcctgggtctccttctggatcaactatgatgcctccgctgccagagtggccctt
ggtatcactacggtgctgaccatgaccaccatcaacacccatctgagagagacgctgcct
aagatcccctacgtcaaggctatagacatgtacctgatgggctgctttgtattcgtcttc
ctggccctgctagagtacgccttcgtcaactacatcttctttggacgggggccccagagg
cagaagagggccgccgagaaactagccgtcgccaacaatgagaaactccgacccgacccc
aataagtggatggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaa
cagagggaaattgacgcgtatgacacgatgtgggatcccatctttgtggacgatgccgca
ttaggactaggcgagcaaagaaataagatgaccgcctccctgactgatgacaacatcctg
tttggttccctggagatgaagaacgagatggggggtgttcctcctgagctgtccaggtcc
ctgggcgctgggggtctgggcgacccccgcaacaccatgctggcctacgacagctccacg
ctgcagtaccgtagggccgccatggcccgccagaactacggtggaggcccccacagtgcc
ctggagcgccacgccacccagaagaagtcccgcctacggagacgggcctcgcagctcaag
gtcaacatccctgacctggctgatgtgaactctatcgacaagtggtccaggatgatcttc
cctactgtgttctccttctttaacgtggtctactggctgtactatgcacactaa
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