Coregonus clupeaformis (lake whitefish): 121539016
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Entry
121539016 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04110
Cell cycle
cclu04114
Oocyte meiosis
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121539016
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121539016
04114 Oocyte meiosis
121539016
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121539016
09158 Development and regeneration
04382 Cornified envelope formation
121539016
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121539016
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121539016
03036 Chromosome and associated proteins [BR:
cclu03036
]
121539016
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121539016
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121539016
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121539016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
DUF3195
Motif
Other DBs
NCBI-GeneID:
121539016
NCBI-ProteinID:
XP_041703124
LinkDB
All DBs
Position
21
Genome browser
AA seq
487 aa
AA seq
DB search
MLTCNKAGIRMVVDVPNSNGPFQPVALMHFRDCAPAEQEKLFVQKLRQCCVLFDFLSDPL
SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVYVFAVNMFRTLPPSSNPTGAEFDP
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVMQLLDLFDSEDPRERD
FLKTTLHRIYGKFLGLRAYIRKHINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
EVMFLNELEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
DNAAKILPIMFPALYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEK
AKSKDREEAWIKIENLAKSNPQLQPRDQRKDRPLVRRKSDLPQDIYTAKALETHRRADGM
ITTHDGL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatgcaataaagctggaatcaggatggttgtggatgtacctaattccaatggg
cctttccagccggtggctcttatgcacttcagagactgtgctccggcggagcaggagaag
ctgtttgtgcagaagctgcgccagtgctgcgtgctctttgacttcctgtcagacccacta
agtgacctgaaatggaaggaggtgaagcgggcggcgttgagcgagatggtggagtacatc
acccacaacaggaacgtcatcacagagcccatctacccagaggtggtgtatgtgtttgca
gtgaacatgttccgaacgttgcctccgtcctccaaccccacaggagcggagttcgaccca
gaggaggacgagcctacacttgaggctgcgtggccacatctccagctcgtctacgaattt
ttccttcggtttttagaatcccctgattttcaaccgaacatagcgaagaagtacatcgac
cagaaatttgtcatgcagcttttagacctgtttgacagcgaagacccgcgggagagggac
ttcctcaaaaccactctccacaggatctatgggaagttcctgggtctacgggcctacatc
agaaaacacatcaataatatattttataggtttatctatgagactgagcaccataatgga
atagcagaattgctggagatacttggaagtataatcaatgggtttgccttaccactaaaa
gaggagcacaagattttcctgttaaaggtcctgttgcctttgcacaaagtcaaatcactt
agtgtctaccatccgcagctggcatactgtgtggtacagtttctagagaaggacagcact
ctcactgaaccagtggttatggcccttctcaaatactggcccaagactcactcccccaaa
gaggtgatgttccttaacgagctggaggagattctggacgtcatcgagccgtctgagttc
gtcaaggtcatggagccattgttcaggcagctggccaagtgtgtgtccagcccacacttc
caggtggcagagagggctctctactactggaacaacgagtacatcatgagtctgatcagc
gacaacgccgccaagatcctgcccatcatgttcccggcgctctaccgcaactccaagacc
cactggaacaagaccatccatggcctcatctacaatgctctcaagctcttcatggagatg
aaccagaagctgtttgatgactgcacacaacagttcagagcagagaaaaacaaagagaag
gccaagtcaaaagaccgggaagaggcctggatcaagattgagaaccttgccaaatccaac
ccacagttacaaccgagagaccagagaaaagaccggcctctagtgcggcgtaagtcggat
ctccctcaggacatctacaccgcaaaagccttggagacccatcgccgagccgacggcatg
atcactacccacgatgggctctag
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