Coregonus clupeaformis (lake whitefish): 121539019
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Entry
121539019 CDS
T08357
Name
(RefSeq) WD repeat-containing protein 20
KO
K24741
WD repeat-containing protein 20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121539019
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121539019
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GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
WD40_WDHD1_1st
EIF3I
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR75_2nd
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
121539019
NCBI-ProteinID:
XP_041703132
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Position
21:complement(6331221..6336115)
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AA seq
591 aa
AA seq
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MNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNVNDQSGNGDRICFNV
GRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATADSVSLLVGFSAGQVQL
IDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVTHSSGNMYLYNVENTCGTTVPH
YQLLKQGKNYSVHTCKSKSTRNPLLKWTVGEGALNEFCFSPDGKFLACVSQDGFLRVFNF
DAVELHGTMKSYFGGLLCVCWSPDGKYIVAGGEDDLVTVWSFVDCRVIARGHGHKSWVSV
VAFDHYTTSVEDADPMEFSGSDEDFQDQIHFGRDRANSTQSRLSKRNSTDSRPVHTTYRF
GSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMNATSPPVGGGLGGGVAGGVVNNGSN
NPSTNGNNSGANTPSNSLPSPLPRSNSLPYSPATTANNKSSVMDSAIASGVSKFATLSLH
DRKDQHHDKDHKRNHSMGHISSKSSNMLTKTRTDPAKTLGTLLCPRMEDLPLLEPLICKK
IAHERLTVLIFLEDCIVTACQEGFIWTWARPGKVGLLSSQNQAVSPSGTVV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaattaaaactcagttcactacacgggaaggcgtctataaactcctcactcac
tccgaatatagccgtcccaacagggtgccgtttaattcccagggttcgaaccccgtcaaa
gtctccttcgtcaacgtcaatgaccagtctggtaacggcgacagaatctgttttaatgtg
ggccgggagctgtacttctacatctacaaaggagttagaaaggcggctgacttgagcaag
cctattgacaagaggatatacaagggaacacagcccacatgtcatgacttcaatcacctc
acggccacggcggacagcgtatccctgctggtgggcttctcggcaggccaggtgcagctc
atcgaccccatcaagaaggagaccagtaagctcttcaatgaggaaagactaatagacaaa
tccagagtgacttgtgtaaaatgggtgcccggctcggagagtttgttcctagtcactcat
tccagtggaaacatgtacttgtacaacgtggaaaacacgtgtggcaccacggttcctcac
taccagttgctcaaacagggcaagaactactcagtgcacacgtgtaagagcaagtccacg
cgcaaccctttgctcaaatggacggtgggcgagggagcgcttaacgagttttgtttttca
cccgacgggaagttcctggcgtgtgtgagccaggacggcttccttcgggtcttcaacttt
gatgcggtggagctgcacgggaccatgaaaagctactttgggggtctgctgtgcgtgtgc
tggagtccggacggaaagtacattgtcgcggggggcgaggatgatctggtgaccgtgtgg
tcatttgtcgactgccgggttatcgcgcgcggtcacggacacaaatcatgggtcagcgtg
gtggcgtttgaccactacacgaccagcgtggaggatgcggaccctatggagttcagtggc
agcgacgaggacttccaggaccagatccactttggtcgcgaccgggccaacagtacgcag
tcccggctctccaagcgcaactccacggacagtcggccagtacacaccacgtacaggttt
ggctcagtgggccaggacactcagctgtgcttgtgggacctcacagaagatatccttttc
cctcacctcccgctttcccggacaagaacgcacaccaatgtgatgaacgctaccagtccc
ccggtgggagggggtttgggaggcggagtcgctggtggcgtagtgaacaatgggagtaat
aaccctagcacgaacggcaacaacagcggcgccaacacccccagtaactccctcccctct
cccctgccacgctccaacagcttaccgtactcgccagctacgactgccaacaacaagagc
agcgtcatggacagtgccattgcctcgggtgtcagcaagtttgccacgctctcccttcac
gatcgcaaagaccagcaccatgacaaggaccacaaacggaaccacagcatgggccacatt
agcagcaagagcagtaacatgctcaccaaaaccagaacagaccctgcaaagactctgggg
acactgctctgtccccgcatggaagacctacccctactagagccccttatctgtaaaaag
atagcacacgagagactgactgtcttaatatttcttgaagactgtatagtgacagcttgt
caggagggatttatttggacatgggcaaggcctggcaaagtgggtttattgtcatcccaa
aaccaagctgtgtctcccagtggaactgtagtatag
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