KEGG   Coregonus clupeaformis (lake whitefish): 121539019
Entry
121539019         CDS       T08357                                 
Name
(RefSeq) WD repeat-containing protein 20
  KO
K24741  WD repeat-containing protein 20
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121539019
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121539019
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 WD40_WDHD1_1st EIF3I WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_WDR75_2nd Ge1_WD40
Other DBs
NCBI-GeneID: 121539019
NCBI-ProteinID: XP_041703132
LinkDB
Position
21:complement(6331221..6336115)
AA seq 591 aa
MNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNVNDQSGNGDRICFNV
GRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATADSVSLLVGFSAGQVQL
IDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVTHSSGNMYLYNVENTCGTTVPH
YQLLKQGKNYSVHTCKSKSTRNPLLKWTVGEGALNEFCFSPDGKFLACVSQDGFLRVFNF
DAVELHGTMKSYFGGLLCVCWSPDGKYIVAGGEDDLVTVWSFVDCRVIARGHGHKSWVSV
VAFDHYTTSVEDADPMEFSGSDEDFQDQIHFGRDRANSTQSRLSKRNSTDSRPVHTTYRF
GSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMNATSPPVGGGLGGGVAGGVVNNGSN
NPSTNGNNSGANTPSNSLPSPLPRSNSLPYSPATTANNKSSVMDSAIASGVSKFATLSLH
DRKDQHHDKDHKRNHSMGHISSKSSNMLTKTRTDPAKTLGTLLCPRMEDLPLLEPLICKK
IAHERLTVLIFLEDCIVTACQEGFIWTWARPGKVGLLSSQNQAVSPSGTVV
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgaacgaaattaaaactcagttcactacacgggaaggcgtctataaactcctcactcac
tccgaatatagccgtcccaacagggtgccgtttaattcccagggttcgaaccccgtcaaa
gtctccttcgtcaacgtcaatgaccagtctggtaacggcgacagaatctgttttaatgtg
ggccgggagctgtacttctacatctacaaaggagttagaaaggcggctgacttgagcaag
cctattgacaagaggatatacaagggaacacagcccacatgtcatgacttcaatcacctc
acggccacggcggacagcgtatccctgctggtgggcttctcggcaggccaggtgcagctc
atcgaccccatcaagaaggagaccagtaagctcttcaatgaggaaagactaatagacaaa
tccagagtgacttgtgtaaaatgggtgcccggctcggagagtttgttcctagtcactcat
tccagtggaaacatgtacttgtacaacgtggaaaacacgtgtggcaccacggttcctcac
taccagttgctcaaacagggcaagaactactcagtgcacacgtgtaagagcaagtccacg
cgcaaccctttgctcaaatggacggtgggcgagggagcgcttaacgagttttgtttttca
cccgacgggaagttcctggcgtgtgtgagccaggacggcttccttcgggtcttcaacttt
gatgcggtggagctgcacgggaccatgaaaagctactttgggggtctgctgtgcgtgtgc
tggagtccggacggaaagtacattgtcgcggggggcgaggatgatctggtgaccgtgtgg
tcatttgtcgactgccgggttatcgcgcgcggtcacggacacaaatcatgggtcagcgtg
gtggcgtttgaccactacacgaccagcgtggaggatgcggaccctatggagttcagtggc
agcgacgaggacttccaggaccagatccactttggtcgcgaccgggccaacagtacgcag
tcccggctctccaagcgcaactccacggacagtcggccagtacacaccacgtacaggttt
ggctcagtgggccaggacactcagctgtgcttgtgggacctcacagaagatatccttttc
cctcacctcccgctttcccggacaagaacgcacaccaatgtgatgaacgctaccagtccc
ccggtgggagggggtttgggaggcggagtcgctggtggcgtagtgaacaatgggagtaat
aaccctagcacgaacggcaacaacagcggcgccaacacccccagtaactccctcccctct
cccctgccacgctccaacagcttaccgtactcgccagctacgactgccaacaacaagagc
agcgtcatggacagtgccattgcctcgggtgtcagcaagtttgccacgctctcccttcac
gatcgcaaagaccagcaccatgacaaggaccacaaacggaaccacagcatgggccacatt
agcagcaagagcagtaacatgctcaccaaaaccagaacagaccctgcaaagactctgggg
acactgctctgtccccgcatggaagacctacccctactagagccccttatctgtaaaaag
atagcacacgagagactgactgtcttaatatttcttgaagactgtatagtgacagcttgt
caggagggatttatttggacatgggcaaggcctggcaaagtgggtttattgtcatcccaa
aaccaagctgtgtctcccagtggaactgtagtatag

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