Coregonus clupeaformis (lake whitefish): 121539023
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Entry
121539023 CDS
T08357
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03030
DNA replication
cclu03410
Base excision repair
cclu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121539023 (pole2)
03410 Base excision repair
121539023 (pole2)
03420 Nucleotide excision repair
121539023 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121539023 (pole2)
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121539023 (pole2)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121539023 (pole2)
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
121539023 (pole2)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
121539023 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
121539023
NCBI-ProteinID:
XP_041703142
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All DBs
Position
21:6297518..6305823
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AA seq
536 aa
AA seq
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MLIVEERLNMEVRRVKTKVSAGFKMRGLMLRPEASRYLVEVLESVSELELEDVIERVMDA
VEKQPLSSSMIELAVMETAVQDCSQSCDETIDNVFNIIGAFDVPRYIYSAERKKFVPLNM
TTHSAPSLCGSARDKAELFRERYTLLQQRTHRHELFTPPVIGAAAEEGRNKFQLKTVEAL
LGSTAKLGDVIVLGMVTQLKEGKFYLEDPSGTVQLNLSKAQFHSGLYTESCFVLAEGWYE
DSVFHVNAFGFPPTEPSSTTRAYYGNVNFFGGPSTTSVKASAKLKQLEEENEDAMFVVVS
DVWLDSVEVLEKIHLMFSGYAAMPPTCFIFCGNFSSAPYGKTQIKSLKESLKVLADAICE
YPSIHNSSRFVFVPGPEDPGPSTILPRPPLADHITEEFRQRVPFSVFTTNPCRIQYFSQE
IVVIREDLVNKMCRNCVRLPSSNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYALRV
YPVPDVIIFADKYDPFNISNTDCLCINPGSFPKSGFTFKVYYPSNRTVEDSKLQSL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgttgattgttgaagaaagattgaacatggaggttcgcagagtgaagacgaaagtatct
gctggcttcaagatgcggggacttatgcttcgacctgaagccagcaggtacctggtggag
gtgttggagtctgtcagtgagcttgaactggaggatgtcatcgagagggtcatggacgct
gtggagaagcagccattgtcctccagtatgattgagctggctgtgatggagactgctgtg
caggactgcagccagtcatgtgatgaaaccatagataatgtcttcaacataattggtgct
tttgatgtgccaagatatatctacagcgcagagaggaagaagtttgtacccctcaacatg
accacccactctgccccaagtctctgtggctcagccagggacaaggccgagctcttcagg
gaacgctacacactcctacagcagcgtacacatcggcatgaactcttcaccccacctgta
ataggggccgctgcagaagaaggcagaaacaaattccagctcaagactgttgaagctctc
ttagggagtacggctaagctaggagatgtcattgtcttggggatggtcacacagcttaaa
gaggggaaattctatctggaagaccccagtggtacagtacagctgaacctctcgaaggca
cagttccacagcggactgtacacagaatcctgctttgttctggcagaaggctggtatgag
gactcagtcttccatgtcaacgcatttggattcccgccgaccgagccatcatccaccaca
agagcctactacggcaacgtgaacttcttcggtggcccgtccaccacatcggtgaaggcc
tcggccaagctgaagcagctggaggaggagaacgaggacgccatgtttgtggtggtctcc
gacgtgtggctggacagcgtggaggtgctggagaagatccacctcatgttctcaggatac
gcagccatgcctcccacctgcttcatcttctgcggaaacttctcctctgccccctatgga
aaaacacaaatcaaatcactcaaagagtcgttgaaagttcttgctgatgcaatctgtgaa
taccccagcatccacaacagtagtcgcttcgtattcgttccaggtcccgaagacccaggt
cccagcacaattctacccaggcccccgttagcagaccacatcacggaggagttcagacag
agggtgccattctctgtgttcactacgaacccatgcagaatccagtacttcagccaggag
attgttgtcatcagagaagacctggtgaacaagatgtgcaggaattgtgtccgactgcct
agcagcaatctcgacattccaaaccattttgtgaagaccatcttgtctcagggccacctg
acaccactgccgttgtatgtcagtccagtgttctgggcctatgactacgctttacgggtt
taccccgtgcctgatgtcatcatctttgcggacaaatatgaccctttcaacatctccaac
acagactgcctctgcatcaacccgggctccttcccaaaaagtggcttcacctttaaggta
tattacccatccaacaggaccgttgaggacagcaaacttcaaagcctctaa
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