Coregonus clupeaformis (lake whitefish): 121539067
Help
Entry
121539067 CDS
T08357
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121539067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121539067
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121539067
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121539067
Nuclear receptors [BR:
cclu03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
121539067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
GCR
Motif
Other DBs
NCBI-GeneID:
121539067
NCBI-ProteinID:
XP_041703233
LinkDB
All DBs
Position
3:complement(2650955..2713717)
Genome browser
AA seq
663 aa
AA seq
DB search
MDSLIGDLDPNLFPMSMRTETDFSRDQDPVDQEGYIGKDQKLFNDNTMDLLQDFELTGSP
SDFYVGDDAFLSSLADGSFLGDESQDRGVSSSTSKPAASTTNSGSFSGSNTTTLNGSSLL
ACQDESNSSTSTTATTPTTTTFPMVKMEKEAGFIQLCTPGVIKQEKTSATRSYSCQMSGS
TGCSTSSSPSELSSASPISICGVSTSGGQSYHFGVNSTITTSGASQQKDQKPSVFSLYPP
LGTIGEAWNNSSYGDGASGIQGLSSPTSSFSSSYASSTSRQGGGAALSTTQGKAGTTHKI
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGTVARGQHNYLCAGRNDCIIDKIRRKNCPA
CRFRKCLMAGMNLEARKTKKLNHLKGVQQPTTAELTPPPLPEARSLVPKSMPQLTPTMLS
LLKAIEPDTIYSGYDGTLPDTSTRIMTTLNRLGGRQVVSAVKWAKSLPGFRNLHLDDQMT
LLQCSWLFLMSFGLGWRSYQQCDGNMLCFAPDLVINQDRMKLPYMTDQCEQMLKISSEFV
RLQVSHDEYLCMKVLLLLSTVPKDGLKSQAVFDDIRMSYIKELGKAIVKREENSSQNWQR
FYQLTKLLDSMHEMVGGLLDFCFYTFVNKSLSVEFPEMLAEIISNQLPKFKAGSVKPLLF
HQK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggactccctgataggggacttggaccccaacctgttccccatgtccatgaggacagag
acggacttctcccgggaccaggaccctgtggatcaggaagggtacattggaaaagaccag
aaactgttcaacgacaacactatggatctcctccaggactttgagctgacaggctccccc
tcagacttttacgtaggggacgacgccttcctctcctccctggctgatggctctttcctg
ggggatgagagccaggatcgtggggtgtctagctccacatccaagccagctgctagtacc
accaacagtggtagttttagtggttccaacaccaccacattgaatggtagcagtctacta
gcatgtcaggatgaatccaactccagcacctctacgacagccacaaccccgaccaccacc
acttttcccatggtgaagatggagaaggaagctggcttcatccagctgtgtactccaggg
gtgatcaaacaggagaagacgtcggccacgcgtagctactcctgccagatgagcggtagt
accggctgctccacttcctcctccccctcagagctgtccagcgccagccccatctccatc
tgtggggtgagcacctctggaggacagagctaccactttggagtcaacagcaccattact
accagtggagcttctcagcagaaggaccagaagccctctgtgttcagcctgtatcctcca
ctggggaccataggagaggcttggaacaacagtagctatggggacggagcttctggaata
caaggtctctccagccctacctcctccttctccagcagctatgccagttctacctccagg
cagggtggtggcgctgcgttgtctacaacccagggcaaggccgggaccacccataagatc
tgtctggtgtgttcagatgaggcgtctggctgtcactatggggtgctcacctgcggaagt
tgcaaggtgttcttcaagagagccgtggaaggtacagtggcaagggggcaacacaactac
ctgtgtgctgggaggaacgactgcatcatcgataagatcagaaggaagaactgtccagcc
tgccgcttccgcaagtgtctcatggcagggatgaacctggaagctcgtaaaaccaagaag
ctgaaccatttaaagggggtgcagcagcccaccacggccgagctgaccccccctcccctc
ccagaggccaggtcgctggtccctaagtccatgccccagctcacccccaccatgctgtct
ctactgaaggccatcgagccagacaccatctactctggctacgacggcaccctgccagac
acctccacacgcatcatgaccaccctcaacaggctggggggacgacaggtcgtatcagcc
gtcaagtgggccaagtccctgccagggttccggaaccttcacctggacgaccagatgact
ctgctgcagtgttcctggttgttcctcatgtccttcggcctgggctggaggtcctaccag
cagtgtgacgggaacatgctctgcttcgctccagacctcgtcatcaaccaggaccgtatg
aagctgccctacatgacagaccagtgtgaacagatgttgaagatctccagtgagtttgtc
agactgcaggtgtctcatgacgagtatctgtgtatgaaggttctgctgctgctcagcacc
gtgccaaaggatggtctgaagagtcaggcagtgtttgatgacatcaggatgtcctacatt
aaggagttggggaaggccatcgtcaagagggaggaaaactccagccagaactggcaacgc
ttctaccagctcaccaagcttcttgactccatgcacgagatggttggtggtctgctggac
ttctgcttctacacgttcgtcaacaagtccctgtcggtggagttcccagagatgttagca
gagatcatcagcaaccagttaccaaaattcaaagccggcagcgtcaagcccctcctcttc
caccagaaatga
DBGET
integrated database retrieval system
