Coregonus clupeaformis (lake whitefish): 121539084
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Entry
121539084 CDS
T08357
Name
(RefSeq) DDB1- and CUL4-associated factor 5 isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121539084
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121539084
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
121539084
NCBI-ProteinID:
XP_041703258
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Position
25:complement(18376914..18396652)
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AA seq
838 aa
AA seq
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MKEVKGCGMRSSVGFLSQRRLFGDPLMKEEFQRLRLAGCTSLYKKDMLGHFGCVNAIEFS
NNGGEYLVSGGDDRRVLLWNMERALHARSAKPLKLKGEHLSNIFCLAFDSTNKRVFSGGN
DEQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTREPPHGEPF
CLANYPSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRTSLLRYGGSMSLQSAMSVRF
NSTGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDEDQYILSGSDD
FNLYMWRIPKDPEAGGPGRVVNGAFMVLKGHRSIVNQVRFNPSTYMICSSGVEKVIKAWS
PYQQPESVGDLDGCVEDKSRSLYSHEEYINLVLNSGSGLSHDYVSQSIQEDPRMMAFFDS
LVRREIEGWSSDSDSDLSEGAILQLHARGRRSTQAVRDSSGALVGTGVAMPVPPAAAAVA
ADSDHSSSSSLAAPEASGEEHPEGVEALQPRRRGSRYQQSVFLLDLVGEDSDSSGFWPDP
MPRPRSPSPRDNSTLSSPTSSPAGASSSSSSTSSTSSEDEELRRASRRERTAARRRRIHF
PRRSSGGRPESAQALYPGGVDSCSYPKISIDEASSSSASSTDLQQDQDSVQVGPHRSGSK
TGRRKSHTLAASSPAVSLDSQDDRAEQEGLLIASLLSQDALQQRTESRAGRRGGRGAALE
RMAEGLDSPEEAEEEDHSGWVTPRSRHHSPGVPIGCRGRLAPDLFESSDSEGERETLAVK
SAGTRTLVEEGGSSSQRGPAPAQGALKRTHLGSRGQGSGEGSGEGSGGSETSEKKFKT
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtgaagggttgcggtatgcggtcctctgtgggctttctgtcccagagaagg
cttttcggggacccgctgatgaaggaagaattccagaggcttcggttggcaggatgcaca
agcctttacaagaaagatatgctgggacatttcgggtgtgtaaacgccatagagttttcc
aacaatggaggggagtaccttgtgtcgggaggggatgaccgcagggtgctgctatggaac
atggagagagcacttcatgcccgctcagccaagcctctcaaactgaagggagaacacctc
tccaacatcttctgcctggccttcgacagcaccaacaagagggtgttctctgggggcaac
gatgaacaggtcatccttcatgatgtagagcggggtgagactctgaacgtgttcctccat
gatgatgcggtgtacggcctgtcagtcagccccgttaacgacaacgtgttcgccagctcc
tctgacgacggacgggtcctcatctgggacacgcgggagccgccacacggagagcccttc
tgtctggccaattacccgtcagccttccacagcgtgatgttcaaccccgcagagccccga
ctgctggccacagccaactccaaggagggggtggggctttgggacatccgcaaacctcgc
acttctctgctgcggtacggtggcagcatgtccctccagagtgccatgtcggtgcgtttc
aacagcacggggacccagctcctggcgctgcggcgcaggctacccccagtcctctacgag
ctacactcacgcctacccagcttccagttcgacaaccagggctacttcaactcctgtacc
atgaagagctgctgcttcgctggagacgaggaccagtacatcttgtcgggatctgatgac
ttcaacctttatatgtggagaatcccaaaggatcctgaagcaggaggcccgggtcgtgtg
gtgaacggagcgttcatggtcctgaagggtcaccgctccatcgtgaaccaggtccggttc
aaccccagcacctatatgatctgctcctccggggtcgagaaggtcatcaaggcgtggagc
ccctaccagcagccggagagtgtgggagacctggatggctgtgtggaggataaatccagg
agcctgtacagccatgaggaatatatcaacctggtgctgaacagcggcagcggcctgagc
cacgactacgtctcacagtccatccaggaggaccctcgtatgatggccttctttgactct
ctggtgcgtcgggagatcgagggctggagttcggactcggacagcgacctgagtgagggg
gccatcctgcagctccacgccaggggccgacgctccacgcaggctgtaagagacagctcc
ggggccctggttgggaccggggtcgccatgcctgtaccacctgctgctgctgctgttgcc
gccgactcagaccactcctcttcgtcctcgttggctgcacccgaggcatcgggggaggag
catcctgaaggggtggaggcgctgcagccgaggaggcgtggcagcagatatcagcagtct
gtgttcttattggatctggtgggagaggactctgactccagtgggttctggcctgacccc
atgccccggcctcgctctcccagcccccgagacaactccaccctctccagccccacctcc
tcccccgccggcgcttcctccagctcttcctccacctcctccaccagctccgaggatgag
gagctgaggagagccagtaggagagaacgtaccgcagcccggagacgacgcattcacttc
ccccgccggtccagtggggggcgccccgagtccgcccaggccttgtaccccggtggggtc
gactcctgctcctaccccaagatctccatcgacgaggcctcatcctcctctgcatcctcc
acggatctgcagcaggaccaggattcggtccaggtcggaccccacaggagtggctctaaa
acggggagacgcaagtctcacaccctcgctgcttctagccctgcagtgtctctggacagc
caggatgaccgagcggagcaggaggggctcctcattgcctcccttctgtctcaagacgcc
ctgcagcagaggaccgagtcccgggcaggaaggcggggggggaggggggctgctttagag
agaatggctgagggcttggatagtccagaagaggcagaggaagaggatcatagtggctgg
gtcacccctcgctccaggcaccacagccctggggtgccgataggctgcaggggtcgtctg
gctccagacctgtttgaatcctcagactccgagggggagagagagaccttagcggtgaaa
tcagcaggcactaggactctggtagaggagggcggatcatcgtctcagagaggcccggcc
ccagcccagggtgcgctgaaacggactcacctggggtcaagaggtcaagggtcaggggag
ggttctggggaggggtcaggggggtcggagacctcagagaagaagttcaagacatga
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