Coregonus clupeaformis (lake whitefish): 121539124
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Entry
121539124 CDS
T08357
Name
(RefSeq) presenilin-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121539124
04330 Notch signaling pathway
121539124
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121539124
Peptidases and inhibitors [BR:
cclu01002
]
Aspartic peptidases
Family A22: presenilin family
121539124
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Motif
Pfam:
Presenilin
DUF3377
Motif
Other DBs
NCBI-GeneID:
121539124
NCBI-ProteinID:
XP_041703320
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Position
25:20199760..20229287
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AA seq
474 aa
AA seq
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MADSVEDIENNMATEAPVPTQNQHPELGVTGVRSRGGGGGAEQNGQPPSTAPPRRPPQVV
ESEEDEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTHNDGQRLIYTPFPEDT
DTIGQRALNSVLNATIMISVIIVMTMVLVLLYKYRFYRVIQGWLFLSSLLLLFFFSFIYL
KEVFKTYNVAMDWITLAVIVWNFGVVGMICIHWKGPLRLQQAYLIMISALMALVFIKYLP
EWTAWLILAVISVYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNMADTG
LGHRPMTRKNSTEAPITQAESLALALGPAPLSPPEDDGGFTPNWMGHQEHQLGPLQSTDE
TRREIQQLPSARPPVMDDEDDEERGVKLGLGDFIFYSMLVGKASAAASGDWNTTLASFVA
ILIGLCLTLLLLAIFKKALPALPISIFFGLVFYFATDNLVRPFMDQLALHQFYI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagtgtggaggatatcgagaacaacatggcgactgaggctccagtgccaacc
cagaaccagcaccctgagcttggggtgacgggggtgcggtccaggggtggagggggcggg
gcggagcagaacggacagcccccctccacagctcccccacgacgcccgccccaggtggta
gagagtgaggaagatgaagatgaggagctgacactgaagtacggggccaaacacgtcatc
atgctcttcgtccctgtcacgctctgcatggtggtcgtcgtggcaaccatcaagtccgtc
agcttctacacccacaacgatggacagaggctgatctacaccccgttccctgaggacaca
gacacaataggacagcgagccctgaactcagtcctcaacgccaccatcatgatcagcgtc
atcatagtgatgactatggtgctggtgctgctatacaagtaccgcttctacagggtgatc
caaggctggctgttcctctcttctctcctcctcctgttcttcttctccttcatctacctc
aaagaagtcttcaagacgtacaatgtggcgatggactggatcaccctggctgtgatcgtc
tggaacttcggggtggtagggatgatctgtatccactggaagggtcctctccgtctgcag
caggcctacctcatcatgatctctgctctcatggctctggtcttcatcaagtacctgcct
gagtggaccgcctggctcatcctggctgttatatctgtctatgatctgctagcagtgctc
tgtcccaaaggtcctctacgtatcctagtggagactgctcaggagaggaacgaacccatc
ttccctgctctcatctactcctcgaccatggtgtggctggtcaacatggcagacactggc
ctcggacacagaccaatgaccaggaagaactcaacagaggcccccatcactcaggctgag
agtctagccctggcgctgggcccggcccctctcagccccccagaggatgacggagggttc
acccctaactggatggggcatcaagagcatcagctgggacccctccagtccacagacgag
acccgacgggagatccaacagctcccctctgccagaccacccgtaatggacgatgaggac
gatgaggagcggggagtgaagctgggtctaggagacttcatcttctacagcatgctggtg
gggaaggcctcagctgcggctagtggagactggaacaccactctggccagcttcgtagcc
atactcatcggcctgtgtttgactcttcttctcctggccatctttaagaaggccctccct
gctctccccatctccatcttctttggcttggtgttctacttcgcgacagacaacctggtc
agaccctttatggaccagctggctctgcaccagttctacatttag
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