Coregonus clupeaformis (lake whitefish): 121539129
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Entry
121539129 CDS
T08357
Name
(RefSeq) calpain-3-like isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121539129
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121539129
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
121539129
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C2: calpain family
121539129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
121539129
NCBI-ProteinID:
XP_041703331
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFATLKQECLTKKCLFEDDTFPATV
ESLGYKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLFRVVPQEQSYSEGYCGLFHFQFWRYGDWVDVVIDDRIPTLNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALESG
SMMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVNECKQSLHKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWVSLSKGEKDKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVACSFVIAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPANAGEES
EEDQQFRSIFQQIAGDVSTGSTGRPGSAWGSEMEITANELKNVLNSIVSKHKDLNSEGFS
LDSCRSMISLMDMDGTGRLNLQEFRHLWNKIKQWQGIFQHYNSDQAGSINSYEMRNAVND
AGFRLNNQLYDIITMRYANEGMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLE
WLQLTMYA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccatctggctttttctgcgaccggttgatccgggagagagagagaaga
gacggagaaggttccctcagcaagcccctacgcttcagcggacaggactttgccacgctg
aaacaggagtgcctcaccaagaagtgcctgtttgaggatgacaccttccctgccaccgtg
gagtctctggggtacaaggagctgggacacaagtccaacaaggtcaagaacatcgtctgg
aagagacccaaggagatctgtgagaaccctcagttcattgtgggcggcgccagcaggaca
gacatttgccagggagatcttggtgactgctggctgctggctgctatagcctgtctgacc
ctgaatgagaagcttctcttccgggtcgttcctcaggaacagagctactccgagggatat
tgtggactcttccacttccagttctggcgatatggcgactgggttgacgttgttattgac
gaccgcatccccaccctcaacaaccagctggtgttcaccaagtctgcagagagaaacgaa
ttctggagtgcccttctggagaaggcctacgccaagcttcacggttcctatgaggccctg
aagggcggcaacaccacggaggccatggaagacttcaccgggggagtgacagagttctat
gagatgaaggaggcgcccaaggagctgtacaagatcatgaagaaggccctggagagtggc
tctatgatgggctgctctatcgactccctggttcctgctcgctttgagacccgtacagtg
acgggccttgtgaagggccacgcctactctgtgactgccgttaacgagtgtaagcagtcc
cttcacaaagagtctaaggtgcgtctggtgcgcctcaggaacccctggggacaggtggag
tggaacgggccctggagtgacaactctaaggagtgggtatctctgtctaagggagagaag
gacaagctccagcatcagagtgctgaggacggtgagttctggatgtcctttgaggacttc
aagaagaactacactaagattgagatctgcaacctgacccctgatgccctggaggatgat
aagatccacaagtggacggtgtctgtgaacgagggtcgctgggtcagaggctgctccgcc
gggggctgtagaaactacccagatacattctggaccaaccctcagtaccgcctgcgtctg
ctggaggaggacgatgacccagaggacaacgaggtggcgtgttccttcgtgatcgctctg
atgcagaagaacagacggaaggagaggaagatgggagccaatctctttaccatcggattt
gccatctacgaggtgccgaaggagatgcacggcaacaagcagcacatgcagaaggacttc
ttcctgttcaactcgtccaaggctcgctgcaagtcctacatcaacctgagggaggtgacc
cagcgcttccgtctgagccccggggagtacgtcatcatcccttccacctacgagcctcac
caggagggagagttcatcctcagagtcttctccgaaaagaggaacacctccgaggagata
gagaacaggatcgaggctgatcatccagtgccggccccagccaatgcgggggaggagagt
gaggaggaccagcagttccggagcatctttcagcagatagccggggatgtgagtacgggg
agtacagggaggccagggagcgcttgggggagtgaaatggaaataaccgccaacgagctg
aagaatgtcctcaacagtatcgtctccaaacataaggacctgaactcagagggttttagc
ctggacagctgcaggagcatgatctctctcatggacatggacgggacgggtagactgaac
ctgcaggagttcagacatctctggaacaagatcaagcagtggcagggaattttccaacac
tataactcggaccaggctggcagcatcaacagctacgagatgagaaatgctgtcaacgat
gcaggtttccgtctcaacaaccagctctatgacatcatcaccatgcgctacgccaacgag
ggcatgaacatcgactttgacagcttcatcagctgtctggtccgcctcgaagccatgttc
agggcgttccaggcctttgaccaggatggagacggtacgatcagactcagtgtcttggag
tggctccagctgaccatgtatgcctag
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