Coregonus clupeaformis (lake whitefish): 121539178
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Entry
121539178 CDS
T08357
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00280
Valine, leucine and isoleucine degradation
cclu00650
Butanoate metabolism
cclu01100
Metabolic pathways
cclu04146
Peroxisome
Module
cclu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
121539178
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
121539178
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121539178
Enzymes [BR:
cclu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
121539178
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GFIT
Motif
Pfam:
HMGL-like
TGT
Motif
Other DBs
NCBI-GeneID:
121539178
NCBI-ProteinID:
XP_041703419
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Position
25:complement(12738866..12744192)
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AA seq
340 aa
AA seq
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MAAVLRFVNRSTFGSRMGHQCLSLSCSAAVAKSVQVGASAGKALPERVKIVEVGPRDGLQ
NEKTLVPAEIKIHLIDMLSEAGLPVIEATSFVSPKWVPQMADQVEVMKGINRRPGVSYPV
LTPNLKGFQAAVKAGAAEVAIFGAASELFSKKNINCSVDESLQRFEEVTKAAKEAGVRVR
GYVSCVLGCPYEGQVSPDKVAQVAKRLYSMGCYEISLGDTIGVGTPGGMTEMLEAVRREV
PVDALAVHCHDTYGQALANILIALQMGISVVDSSVAGLGGCPYAQGASGNVATEDVVYML
HGLGIQTGVDLPKLMDAGAFICSSLNRKTSSKVAQATCKL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtcttgagatttgtcaacagaagcacctttggttctagaatgggtcatcaa
tgtttatccttgagttgttcagcagcagtggcgaaatcagttcaggttggtgcatctgca
gggaaggctctcccagagagggtaaagatagtggaggttggacccagggatggccttcag
aatgaaaagactctcgtccctgctgaaattaagattcacctgattgacatgctctcagag
gcgggtcttcctgtgattgaagccacaagctttgtctctccaaaatgggtcccacagatg
gccgaccaggtggaggtgatgaaggggatcaacagacggcctggtgtgtcctatcccgta
ctgacccccaacctcaagggcttccaggcagctgtgaaggcaggagcagcagaggtggcc
atatttggcgctgcctctgagctgtttagtaagaagaacatcaactgctctgtggatgag
agtctgcagcgctttgaggaggtcaccaaagcagccaaagaggccggtgtgcgagtcaga
gggtatgtgtcatgtgtgcttggatgcccatatgagggccaggtgtcaccagacaaagtg
gctcaggtagccaagcgtctgtactccatgggttgctatgagatctctctgggcgacacc
ataggcgtgggcacaccgggcggcatgactgagatgctggaggcagtgagaagggaggtg
cctgttgacgccctggcagtccactgccatgacacctatggtcaggctctggccaacatc
ctgatcgccctgcagatgggcatcagtgttgtggactcgtcagtggctggcctgggtggg
tgtccatatgcacaaggggcctctgggaatgtggctacagaggatgtggtgtacatgctg
catggactcggcattcagacgggagtggacctgcccaagctgatggatgctggagcgttc
atctgtagttccctgaacagaaagaccagctctaaagtggcccaggcaacctgcaaactc
tga
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