Coregonus clupeaformis (lake whitefish): 121539257
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Entry
121539257 CDS
T08357
Name
(RefSeq) sodium/bile acid cotransporter-like isoform X1
KO
K14341
solute carrier family 10 (sodium/bile acid cotransporter), member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121539257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121539257
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
121539257
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Gene cluster
GFIT
Motif
Pfam:
SBF
DUF1270
Motif
Other DBs
NCBI-GeneID:
121539257
NCBI-ProteinID:
XP_041703547
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Position
25:9332433..9339290
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AA seq
379 aa
AA seq
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MNGTMNQTEGQYRDGYETAWNGSNTYNITPRNVTTGFQSLFSPVMDMAISGITIIILFIT
MVSLGCTMEISKIKAHILKPKGVAIAVVAQFGIMPLTAFSLAKIFQLGPIEAVTVLICGC
CPGGNLSNIFALALKGDMNLSIVMTTCSTVLALGMMPLLLFLYCHGFNNLENAVPYTGIT
IALIMTLAPCAIGIAINHRVPQYSQIIIKVGLSILLIASVAIGVMSGITIGGTVWVVLSP
QLLAAASLMPLTGYLLGYIMSTIFKVNHQCRRTISIETGCQNIQLCSTILKVAFPPEVIG
PLYLFPLIYIIFQGGEALLFIILFRCYQRFKPPAEGKCHSCLGNTRVAWLRERTVRLPRL
LLQCARLFDKGRKYRQSFL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtaccatgaaccagacagagggacagtacagagatggctatgagacagcttgg
aatggcagcaacacctacaacatcacacctcgtaatgtcaccactggcttccagtccctc
ttctccccggttatggacatggccatcagtggcatcaccatcatcatcctcttcatcacc
atggtgtccctgggctgcaccatggagatctccaagatcaaggcccatattctgaagccc
aaaggtgttgccatcgcagtggtggcccagtttggtatcatgcctctcactgccttcagc
ctggccaaaatcttccagctgggccccatcgaggctgtgaccgtgctgatctgtggctgc
tgtccggggggaaacctctccaacatcttcgccctggccctgaagggtgacatgaacctc
agcattgtaatgaccacatgttctactgttttggccctgggtatgatgcctctgctgctc
ttcctatattgccacggcttcaataacttggaaaacgctgtgccttacactggcatcacc
atagctctcatcatgaccctagcgccctgtgccattggcatagccatcaaccaccgggta
ccacagtactctcagatcatcatcaaggttggtctaagcatcttactgattgcctctgtg
gccattggcgtcatgtcaggcatcactattgggggaacagtgtgggtggttctctcaccc
caactcctggctgcagcttcactgatgcccctgacaggctacctgctgggatacatcatg
tccaccatcttcaaagtcaatcatcaatgcaggaggactatttctatagagacaggctgt
cagaacatccagctgtgttccaccatcttgaaggtggcctttcccccggaggtcattggg
cccctgtatctgttcccgctgatctacatcatattccagggaggtgaggcgttgcttttc
atcatcctcttcagatgttaccaaaggttcaagccaccagctgagggtaagtgtcacagc
tgtctgggtaacactagggtagcgtggctcagagaacgtactgtccgcttaccccggttg
ttgttacagtgtgccagactgttcgacaaagggagaaaatataggcagtctttcctctaa
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