Coregonus clupeaformis (lake whitefish): 121539265
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Entry
121539265 CDS
T08357
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121539265
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121539265
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121539265
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121539265
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121539265
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
Others
121539265
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
121539265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
ANCHR-like_BBOX
GBP
AIG1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121539265
NCBI-ProteinID:
XP_041703561
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Position
25:9066949..9076938
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AA seq
846 aa
AA seq
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MSGHGSSSEKEINTSLICQENYACGGSEEAAFECDKCRSLQCVRCEKELHSQECLQNHER
VEIGPGHVPYCDNCKGGKEGTVNGRRHRSVVRCQNCKVNLCQQCRRSTHNGGNKKKHQLT
AYPPPPKPAELNSTPPHKSTEDNSNPPPKPVHVNSTPPPKPAEINSTLPPKPVEVKLTPP
PKPPQVNSTPPLKPAEINLSSVVDEAEVQKAKLLEKVCSFLLVDVNEEMQIKDEGAFVKE
LNCKPDKLIKVVSIFGNTGEGKSHTLNHTFFMGREVFKTSPTQESCTVGVWAAFDPIHKV
VVIDTEGLLGNSSNQGQRTRLLLKVLAISDLIIYRTHADRLHDDLFKFLCDASDAYLKHF
TKELKATTARCGLDVPLSTLGPAVIIFHETVHTKLLGSDNSSESVDRMLLERFRKLGRFP
EAFSSIQYRGTRTCSPPTDFGGLQRTLEQLLDNNATRSPRSPVVIFKALQALSERFNGEI
SDELIAQNCFFPDEYFTCSCLCLSCGSGCKNSMNHLGEGVCHEAKHRCRYSPQYDNRIYT
CKACYEGGKEVVVVPKTSASSDSPWLGLARYAWSGYVIECPNCGVIYRSRQYWYGNQDPV
ETVVRTEIQHIWPGADGFLKDNSNAAQRLLDGVNFMAQSVSELSVKPAKAVTSWLTDQIA
PTYWKPNSLILTCLKCQEVFQDNDTKHHCRACGEGFCDACSSKATPVPEKGWGLAPVRVC
DTCYEQRATHTELLHAEVEDEEGGNLARKVGEAVSNTLGAVVTAIDIPLGLVKDAARPTY
WVPDQDILSCHNCQCNFTAKLSKHHCRSCGQGVCDECSLERRPVPSRGWDHPVRVCANCN
QKPGDL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccatggttcatcatcagaaaaggaaattaacaccagtctaatttgtcaagag
aactatgcttgtgggggctcagaagaggctgcttttgaatgtgacaaatgtagaagcttg
cagtgtgttcgctgtgagaaggaactccatagtcaagagtgcctgcagaaccatgaacgg
gtcgagatcggcccagggcatgtaccctactgtgacaactgcaaaggagggaaggaaggg
acagtgaatggccgccgccacaggtctgttgtccgctgccagaactgcaaagtcaacttg
tgccaacagtgtcggagaagcacccataatggaggtaacaagaagaagcaccaactcacc
gcctatcctcctccacccaaacctgcagagctcaactcaacccctccacacaaatctaca
gaggacaactcaaatcctccaccaaaacctgtacatgtcaactcaacccctccacccaaa
cctgcagagatcaactcaacccttccaccaaaacctgttgaggtcaaattaacccctcca
cccaaacctccacaggttaattcaacccctccactcaaacctgcagagatcaacttaagc
tcagtggtagatgaggcagaagtccagaaggcaaaacttctggagaaagtctgcagtttt
cttctggttgatgtgaatgaggagatgcagataaaggacgaaggtgcgtttgtgaaggaa
ttgaactgcaagcctgacaagctgatcaaggtggtgtcaatctttggcaacacaggagag
ggtaaatcccacactctgaaccacactttcttcatgggcagggaggtgttcaagacctcc
cccacacaggagtcctgcacagtgggggtgtgggcggcattcgatcccatccacaaggtg
gtggtcatcgacacagagggcctgctgggtaacagctccaaccagggccaaagaacacgc
ctcctgctcaaggtgctagctatctccgacctcataatctaccgtacccacgccgaccgc
ctccatgacgacctcttcaagtttctgtgcgacgcgtcggacgcctacctgaagcatttc
accaaggagctgaaggccactacggcccgctgtggcctggacgtgcctctgtccaccctg
ggcccggccgtcatcatcttccatgagaccgtccacaccaagctgctgggctcagacaac
tcatcagagtctgtagatcggatgctacttgagcgtttcaggaagctgggccgtttccca
gaggccttcagctccatccagtaccgaggcacgcgtacctgtagccccccaacagacttt
ggtggcctgcagcgcaccctggagcagctgctggacaacaacgccacccgctcccctcgc
tccccagtcgtcatcttcaaagccttgcaggccctgagtgagcgcttcaatggggagatt
tctgatgagctcatagcccaaaattgcttcttccccgatgagtacttcacctgctcctgc
ctctgcctcagttgcggctctggctgcaagaacagcatgaaccaccttggggagggggtg
tgtcatgaggccaaacaccgctgccgttactcaccccaatacgacaatcgcatctacacc
tgcaaggcctgttacgaagggggaaaggaggtggtggttgttcccaagacctctgcgtcc
tcagactctccatggctgggccttgccagatacgcctggtcagggtacgtgattgaatgt
ccaaactgtggggtgatctatcggagccggcagtactggtatgggaaccaggacccagta
gaaacggtggtccgcactgaaatccagcatatatggcctggggcagatggattcctgaag
gacaatagcaatgcagcgcagcgtctgctggatggtgttaacttcatggcccagtctgtg
tcagagctcagtgtgaagcctgctaaggcagtcacctcctggctaacggatcagatcgcc
ccgacctactggaaacccaactccctcatcctgacatgccttaagtgccaagaggtcttc
caagacaacgacaccaagcatcactgccgtgcctgtggggaagggttctgtgacgcatgc
tcttccaaagccacgcccgtccctgagaaaggctggggtctggcccccgtgagagtctgt
gacacctgttatgagcagagggccacacatacagagctgttgcatgcagaggttgaagat
gaggaaggtggaaacctagccaggaaggttggagaagcagtttcaaacacactgggcgcc
gtggttactgctattgacatcccactgggtctggtgaaggatgctgcgcgtcccacctac
tgggtgcctgaccaggatatcctctcctgccacaactgccagtgcaacttcactgccaag
ctgtccaagcaccactgtcgctcctgcgggcaaggcgtgtgtgacgagtgctcgctggag
cgtcggccggtcccgtcgcggggctgggaccaccccgtccgtgtttgtgctaactgcaac
cagaaacctggagacctttaa
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