Coregonus clupeaformis (lake whitefish): 121539280
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Entry
121539280 CDS
T08357
Name
(RefSeq) transforming growth factor beta-3 proprotein
KO
K13377
transforming growth factor beta-3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04068
FoxO signaling pathway
cclu04110
Cell cycle
cclu04218
Cellular senescence
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121539280
04350 TGF-beta signaling pathway
121539280
04068 FoxO signaling pathway
121539280
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121539280
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121539280
04218 Cellular senescence
121539280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121539280
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121539280
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
121539280
NCBI-ProteinID:
XP_041703588
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Position
25:complement(8111123..8127684)
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AA seq
409 aa
AA seq
DB search
MHLGKALLFFLLLNCVTMTLSLSTCTTVDIDHIKKKRVEAIRGQILSKLRLTSPPQTVGP
NQVPFQVLSLYNSTKELIEELGRDRQQSCGQDNTETEYYAKEIYKFNMIHGPPENNDLPY
CPKGITSKVFRFNVSAMEKNSTNLFRAEFRALRVPNSSAKRNEQRIELYQILRPDDHIAK
QRYIGGKNVLTKGTPEWVSFDVTDTVREWLMYRETNLGLEISVHCPCHTFNTNGDIIENV
NEVLEVKFKGVEGDYDESRWDLGRLKKQKEQLFPHLILMMLPPHRIDAQSSSRRRKRALD
TNYCFSNYEENCCVRPLYIDFRQHLGWRWIHEPKGYYANFCSGPCPYLRSADTTHSSMLS
LYNTLNPEASASPCCVPQDLEPLTILYYVGRTPKVEQLSNMIVKSCKCS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgggtaaagcacttctgtttttcctcctgttgaactgtgtgaccatgactttg
tcactatccacttgcaccactgtggacatagaccacataaagaaaaagagagtagaggca
atccgaggacagattctcagtaaacttcgactgaccagcccgccgcaaacagtgggtccg
aatcaggtaccgtttcaggtgctgtcgctctataacagtacgaaggagctgatcgaggag
ttgggaagagacagacagcaaagttgtggacaggataacacagagactgaatattacgcc
aaagagatttacaagttcaatatgattcatggaccaccagaaaacaatgaccttccctac
tgccccaagggcatcacttccaaggtattccgcttcaacgtctcggccatggagaagaac
tccaccaacctcttcagagccgagttccgagcccttcgtgtccccaactctagcgccaag
aggaacgagcagaggattgagctctaccagattctgcggccagacgaccacatagccaag
cagcgctacatcgggggcaagaacgtcctgaccaaaggaacgccagagtgggtctccttc
gatgtcacagacacagtcagggaatggcttatgtaccgagagaccaacctcggcctagag
atcagtgtgcactgcccctgccacaccttcaacaccaacggtgacattatcgaaaacgtc
aatgaggtgctagaagtcaagttcaaaggtgtggagggtgactacgatgagagccgctgg
gacctgggcagactgaagaagcagaaggagcagctcttccctcacctcatcctcatgatg
ctgccccctcacaggatagacgcccagtcctcatcccgcagacgcaagagagccctggac
accaactactgcttctctaactatgaggagaactgctgtgtacgacccctctacattgac
ttccgccagcacctgggctggaggtggatccacgagcctaagggatactacgctaacttc
tgctctgggccctgcccttacctaaggagcgcagacaccacacacagctcgatgctgagt
ctgtacaacaccctgaaccctgaggcatctgcctctccctgctgtgtgcctcaggacctg
gagccccttaccatcctctactacgtgggccgcacccccaaggtggagcagctctccaac
atgatcgtcaagtcctgcaagtgcagctaa
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