Coregonus clupeaformis (lake whitefish): 121539309
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Entry
121539309 CDS
T08357
Name
(RefSeq) ADP-ribosylation factor 6
KO
K07941
ADP-ribosylation factor 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121539309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121539309
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121539309
04031 GTP-binding proteins [BR:
cclu04031
]
121539309
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
121539309
Arf GTPases and associated proteins
Arf GTPases
121539309
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121539309
Exosomal proteins of colorectal cancer cells
121539309
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Arf [OT]
121539309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
G-alpha
Ras
SRPRB
Gtr1_RagA
MMR_HSR1
GTP_EFTU
6PF2K
SpoOE-like
CRISPR_Cas2
Motif
Other DBs
NCBI-GeneID:
121539309
NCBI-ProteinID:
XP_041703636
LinkDB
All DBs
Position
25:7160734..7164965
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AA seq
176 aa
AA seq
DB search
MMGKMLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKF
NVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILI
FANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWLTSNYKS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgatggggaaaatgctatcgaaaatctttggcaacaaggagatgagaatattgatgctt
ggacttgatgctgctggaaagaccaccatcctttacaaactgaaacttggacagtcagtc
accacaattcccacagttggtttcaatgtcgagactgtcacttacaaaaatgtaaaattc
aatgtatgggacgttggaggccaagataagatccgtcccctgtggcgacactactacacg
ggcactcaagggttaatcttcgttgtggattgcgcagacagagatcgcatcgacgaggcc
aggcaggaactccatcgcatcattaatgaccgtgagatgagggacgccatcatcttgatt
tttgccaataagcaagacctgcccgatgccatgaaaccacacgaaatccaagagaaacta
ggattgacccgcatcagagataggaattggtatgttcagccctcctgtgcaaccacggga
gatggactatatgaggggttgacatggctaacatcaaattacaaatcctaa
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