Coregonus clupeaformis (lake whitefish): 121539316
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Entry
121539316 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein transferase RMND5B-like
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121539316
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121539316
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
121539316
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
Rtf2
zf-RING_2
GRAS
Motif
Other DBs
NCBI-GeneID:
121539316
NCBI-ProteinID:
XP_041703654
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Position
35:42428473..42438751
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AA seq
391 aa
AA seq
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MEQCACVERELEKVLHRFVMYGHQSEERLDELLRSVCELRGQLVTFGVQDADLSVLSQTM
AQCCKNIKETVQLLASRHKDIHGSVSKVGKAIDRNFDAEVSAVVAETVWDSPERQKYLSE
TIVEHLYRQGMLSVAEDLCQESGVVIDMSMKQPFLELNRILEALRMQDLRPALEWAVTNR
QRLLDLNSTLEFKLHRLYFISLLNGGITNQLEALQYARHFQPFASQHQRDIQILMGSLVY
LRHGIENSPYRSLLETNQWAEICNSFTRDACSLLGLSVESPLSVSFASGCMALPVLMNIK
QVIEQRQCSGVWTHKDELPIEIDLGKKCWYHSVFACPILRQQTSESNPPMKLICGHVISR
DALNKLTNAGKLKCPYCPMEQNPSDAKQIFF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgcgtgtgtggagcgggagctggagaaggtgctccataggtttgtcatg
tatggacaccagtcagaggaacggctggacgaactactacgcagcgtctgtgagctacgg
ggacagctggtcacattcggggtacaagatgcagatctgtcggtgctgtctcagacgatg
gcccagtgctgtaagaacattaaagaaacggtacagctgctggcctccagacacaaggac
atccacggcagtgtctccaaagtcggcaaagctatcgacaggaactttgatgcagaggtg
agtgcagtagtggcagagacagtgtgggactcacctgagagacagaagtacttgagtgag
accatcgtggaacacctgtacagacaaggcatgctgagcgtggcagaagacctatgtcag
gagtctggagtagtgattgacatgagtatgaagcagccgttcttggaactcaacaggatc
ctggaggctttgaggatgcaggacctcagaccagcactagagtgggcggtaacaaaccgg
cagcgcctgctggacctgaacagtaccctggagttcaagctgcaccgcctctacttcatc
agcctgttaaacggaggcatcaccaaccagctggaggcgctacagtacgccaggcacttc
cagcccttcgcctcacagcaccagagagacatccagatcctcatgggtagtctggtgtac
ctgcggcacggcatagagaactctccctaccgctcgctgctagagaccaaccagtgggct
gagatctgtaacagcttcaccagggacgcttgctctctgctggggctttctgtagagtca
cctctcagtgtcagttttgcgtcaggctgcatggctctgccagtcctgatgaacatcaaa
caggtgatcgaacagagacaatgtagcggagtctggacacacaaggacgagctgcctatt
gagatagacctggggaagaagtgctggtaccactctgtgttcgcctgtcccatcctcagg
cagcagacgtcagagagcaaccctcccatgaagctcatctgtggacacgtcatctccaga
gatgccctcaacaaactcaccaacgctggaaaactgaaatgtccctactgtcccatggag
cagaacccgtcagatgcaaagcagatcttcttttga
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