KEGG   Coregonus clupeaformis (lake whitefish): 121539360
Entry
121539360         CDS       T08357                                 
Symbol
ppp2r5eb
Name
(RefSeq) protein phosphatase 2, regulatory subunit B', epsilon isoform X1
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015  mRNA surveillance pathway
cclu04110  Cell cycle
cclu04114  Oocyte meiosis
cclu04261  Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121539360 (ppp2r5eb)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    121539360 (ppp2r5eb)
   04114 Oocyte meiosis
    121539360 (ppp2r5eb)
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    121539360 (ppp2r5eb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121539360 (ppp2r5eb)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121539360 (ppp2r5eb)
   03036 Chromosome and associated proteins [BR:cclu03036]
    121539360 (ppp2r5eb)
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     121539360 (ppp2r5eb)
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     121539360 (ppp2r5eb)
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     121539360 (ppp2r5eb)
SSDB
Motif
Pfam: B56 Sec7-like_HUS
Other DBs
NCBI-GeneID: 121539360
NCBI-ProteinID: XP_041703719
LinkDB
Position
25:complement(5420276..5461856)
AA seq 467 aa
MSSAATTPPSVDKVDGFSRKSVRKAKQKRSQSSSQFRSQGKPIELTPLPLLKDVPAPEQP
ELFLKKLQQCCTVFDFMDTLSDLKMKEYKRSTLNELVDYVTVSRGYLTEQAYPEVVKMVS
YNIFRTLPPSDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKF
VLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAE
LLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPALTE
PVIRGLLKFWPKTCSQKEVMYLGELEEILDVIEPTQFVKIQEPLFKQISRCVSSPHFQVA
ERALYYWNNEYIMSLIEENSSVILPIMFASLYRISKEHWNPAIVALVYNVLKAFMEMNST
LFDELTATYKSDRQREKKKEKEREELWKKLGDLELKRGLRSDGIIPT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtcctcggcagccaccacacctccatctgtggacaaagtggacggattttcacggaag
tctgtcaggaaggccaagcaaaagcggtcgcagagttcatcccaattccggtctcagggc
aaacccatcgagctcacgcccctgcctctgctcaaggacgtgccggcgccggagcagccg
gagctgttcctgaagaagctgcagcagtgctgtactgtgtttgatttcatggacacgctg
tctgacctgaagatgaaggagtacaagcgctccacgctcaacgagctggtggactatgtc
accgtcagcaggggctacctgacagaacaggcttacccggaggttgtcaaaatggtgtct
tacaacatattccggacccttccgcccagtgacagtaatgagtttgacccagaggaggat
gaacccacactggaggcctcatggccacacttacagctggtatatgagttcttcatacga
ttcttggagagtcaggaattccagcccagcattgccaaaaagtacatagaccagaaattc
gttctacagctcttggagctctttgacagtgaagaccctcgggagagagactacctgaaa
acagtcttacacagaatctatgggaaattcctggggctgagggcttttatacgaaaacag
ataaataatatttttctacgttttgtttatgagactgagcacttcaacggggttgctgag
ttgctggagatcttgggaagcataatcaatggtttcgccctgccgctcaaagcagagcat
aaacagttcctggtcaaagtgttgatccccctccacactgtcaggagtctgtccctcttc
cacgcacagctggcgtattgcattgtacagttcctagagaaagacccagcgttaacagaa
ccagtcatcaggggcttactgaagttctggccaaaaacctgcagtcaaaaagaggtgatg
tacctgggggagctggaggagatcctagacgtgatcgagccgacacagttcgtcaagatc
caggagccgctcttcaaacagatatccagatgtgtgtccagcccacacttccaggtggcg
gagagggctctgtactactggaacaacgagtacatcatgagtctgatcgaggagaactcc
agcgttatcctgcccatcatgttcgccagcctctacaggatctccaaagagcactggaac
ccggcgatagtggcgttggtgtacaacgtactaaaagccttcatggagatgaacagtacc
ttgtttgatgaactcacagctacttacaagtcagaccgccagcgtgagaagaagaaggag
aaggagagggaggagctttggaagaagctgggggacctggagctgaagaggggccttagg
agcgacgggatcattcccacttaa

DBGET integrated database retrieval system