Coregonus clupeaformis (lake whitefish): 121539360
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Entry
121539360 CDS
T08357
Symbol
ppp2r5eb
Name
(RefSeq) protein phosphatase 2, regulatory subunit B', epsilon isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04110
Cell cycle
cclu04114
Oocyte meiosis
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121539360 (ppp2r5eb)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121539360 (ppp2r5eb)
04114 Oocyte meiosis
121539360 (ppp2r5eb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121539360 (ppp2r5eb)
09158 Development and regeneration
04382 Cornified envelope formation
121539360 (ppp2r5eb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121539360 (ppp2r5eb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121539360 (ppp2r5eb)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121539360 (ppp2r5eb)
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121539360 (ppp2r5eb)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121539360 (ppp2r5eb)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121539360 (ppp2r5eb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
121539360
NCBI-ProteinID:
XP_041703719
LinkDB
All DBs
Position
25:complement(5420276..5461856)
Genome browser
AA seq
467 aa
AA seq
DB search
MSSAATTPPSVDKVDGFSRKSVRKAKQKRSQSSSQFRSQGKPIELTPLPLLKDVPAPEQP
ELFLKKLQQCCTVFDFMDTLSDLKMKEYKRSTLNELVDYVTVSRGYLTEQAYPEVVKMVS
YNIFRTLPPSDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKF
VLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAE
LLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPALTE
PVIRGLLKFWPKTCSQKEVMYLGELEEILDVIEPTQFVKIQEPLFKQISRCVSSPHFQVA
ERALYYWNNEYIMSLIEENSSVILPIMFASLYRISKEHWNPAIVALVYNVLKAFMEMNST
LFDELTATYKSDRQREKKKEKEREELWKKLGDLELKRGLRSDGIIPT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcagccaccacacctccatctgtggacaaagtggacggattttcacggaag
tctgtcaggaaggccaagcaaaagcggtcgcagagttcatcccaattccggtctcagggc
aaacccatcgagctcacgcccctgcctctgctcaaggacgtgccggcgccggagcagccg
gagctgttcctgaagaagctgcagcagtgctgtactgtgtttgatttcatggacacgctg
tctgacctgaagatgaaggagtacaagcgctccacgctcaacgagctggtggactatgtc
accgtcagcaggggctacctgacagaacaggcttacccggaggttgtcaaaatggtgtct
tacaacatattccggacccttccgcccagtgacagtaatgagtttgacccagaggaggat
gaacccacactggaggcctcatggccacacttacagctggtatatgagttcttcatacga
ttcttggagagtcaggaattccagcccagcattgccaaaaagtacatagaccagaaattc
gttctacagctcttggagctctttgacagtgaagaccctcgggagagagactacctgaaa
acagtcttacacagaatctatgggaaattcctggggctgagggcttttatacgaaaacag
ataaataatatttttctacgttttgtttatgagactgagcacttcaacggggttgctgag
ttgctggagatcttgggaagcataatcaatggtttcgccctgccgctcaaagcagagcat
aaacagttcctggtcaaagtgttgatccccctccacactgtcaggagtctgtccctcttc
cacgcacagctggcgtattgcattgtacagttcctagagaaagacccagcgttaacagaa
ccagtcatcaggggcttactgaagttctggccaaaaacctgcagtcaaaaagaggtgatg
tacctgggggagctggaggagatcctagacgtgatcgagccgacacagttcgtcaagatc
caggagccgctcttcaaacagatatccagatgtgtgtccagcccacacttccaggtggcg
gagagggctctgtactactggaacaacgagtacatcatgagtctgatcgaggagaactcc
agcgttatcctgcccatcatgttcgccagcctctacaggatctccaaagagcactggaac
ccggcgatagtggcgttggtgtacaacgtactaaaagccttcatggagatgaacagtacc
ttgtttgatgaactcacagctacttacaagtcagaccgccagcgtgagaagaagaaggag
aaggagagggaggagctttggaagaagctgggggacctggagctgaagaggggccttagg
agcgacgggatcattcccacttaa
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