Coregonus clupeaformis (lake whitefish): 121539363
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Entry
121539363 CDS
T08357
Name
(RefSeq) protein jagged-2 isoform X1
KO
K21635
jagged-2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121539363
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Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
EGF_2
DSL
EGF_DL_JAG
JAG1
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
DUF1180
Motif
Other DBs
NCBI-GeneID:
121539363
NCBI-ProteinID:
XP_041703727
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Position
25:5018691..5046252
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AA seq
1251 aa
AA seq
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MWNCMGISNCLSVVCLLLTVWIEVSQSSGYFELQLIAVQNANGELSDGDCCDGERNTQDL
RCSSDECDTYFRVCLKEYQTEVTTTGLCIYGTGSTNVIGGNSFQFKSAKNNQNRINDGGK
IVIPFQFAWPGAYTLIVEAWDWDNGTHSSSGEDLLIERSVRKGMINPGDDRQTIQHNGPT
ANFEYSIRMRCDENYYGSKCNKQCRPRDDGHGHYVCDQFGNRGCMEGWMGTYCTTAICKQ
GCNLLQGSCSAPGECTCTYGWQGPFCDNCLPYPGCVHGTCVKPWQCSCEKNWGGLLCDKD
LNYCGTNKPCKNGGRCMNTEPDEYNCACPDGYSGKNCEIAEHACVSNPCANRGTCHEVPS
GFECHCPAGWAGPTCAKDMDECASNPCAQGGTCIDMENGFECLCLPQWAGKTCQIDANEC
MGKPCLNAYSCKNLIGGYHCACFRGWAGQNCDINVNSCHGQCQNGGICKEGRRGYVCACS
LGFVGRHCEIQRNSCASGPCRNGGRCHTLLDGFMCECPHGYTGTTCEVQNNLCSPDPCQN
KAQCHSLMEDFYCACPDDYEGKTCSELKDHCKTNPCEVIDSCTVAVATNDTQEGVWHISS
NVCGPHGRCISQPAGNFTCSCEPGFTGTYCHENINDCVPPPCKNGGTCIDGISSFQCFCP
DGWEGTLCDMDVNECSRNPCKNGGRCVDLLNDFYCQCQDNWKGKTCHSRESQCDSSTCSN
GGTCFDHGDTFRCTCPSGWRGSTCNTAKNSTCDSNPCENGGTCVGAGDAYTCICKDGWEG
PTCAQNANDCNPQPCYNGGVCVDGVNWFRCECAPGFAGPDCRINIDECQSSPCAYGSTCV
DEINSFLCVCPLGRAGPHCQEFIGIGKACRYSGLQFPHGSRWEEKCNTCQCVNGNVRCSK
VRCGRRPCLLRRGAPGPDSSAPCPGGQECVEHQFLTCFAKPCHQWGVCSTPDPPLPLHTQ
CEPNSGYLDNSCARITLIFNRDKVPQGTTVENICSELRYLPITQTLAKERTLLILCDLSY
SNSDAVEVAMSYDQDGQERNGDRGQIQEAASAIVGALSKRHNSTVMLAVVEVKVETQVMP
QSVDHLVPVLCVVFSVLWIFCIVVCVWWTRKRKKERERESAAEDSTVNNQLEPLRVSLPQ
HKDNRDKDIQHECKKLMSPPDRTCDGAEEEEEEDGEEEELRRGGMELDKCSTQKCSLAGV
QDKMMAKGGVICTMRSAPVKPPHRTAYSPKDNRCKNLSAANVSEDVKDHYV
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattgtatggggatttcgaattgcctgtcagtagtgtgtcttcttctgaccgtg
tggattgaggtgtcccagtcctcaggctattttgagctgcagctgattgcggtacagaac
gcaaatggtgagttgtcggacggggactgctgcgacggcgaaaggaacacgcaggatctc
agatgtagcagcgatgagtgtgatacgtacttcagagtgtgtctaaaggaataccaaacg
gaggtcacgaccacgggattgtgcatctatggaactggatctactaacgttatcggcgga
aatagttttcaatttaagagcgccaaaaacaatcaaaaccgaatcaacgatggtggaaag
atcgtcatcccattccagttcgcttggccgggggcgtacactctgatcgtggaagcgtgg
gactgggacaatggtacacatagcagcagtggtgaggatctgttgattgagcgaagtgtc
cgtaaaggaatgatcaaccctggagatgacagacagactatccaacacaatggtcctaca
gccaactttgagtacagcatccgcatgcgctgtgacgagaactactatggcagcaagtgc
aacaagcagtgccggccacgcgatgacgggcatggccactacgtgtgtgaccagtttggg
aatagaggatgtatggagggctggatggggacctactgtacaactgctatctgcaagcag
ggctgcaacctgctgcaagggtcctgcagtgccccaggagaatgcacgtgtacgtatggg
tggcagggtccattctgtgacaactgcctgccctacccaggctgtgtccacgggacctgc
gtcaagccctggcagtgcagctgtgagaagaactggggaggcctgctgtgtgacaaagat
ctgaactactgtgggacgaacaagccgtgtaagaacggaggaaggtgtatgaacacggag
ccagatgagtacaactgtgcctgtcctgacggctactcaggcaaaaactgtgagatagcg
gaacacgcctgtgtgtctaacccctgtgccaataggggcacctgccacgaggtaccgtct
gggtttgagtgccactgtcctgcaggctgggcagggcccacctgcgctaaagacatggat
gagtgtgcgtccaacccctgtgctcagggtgggacctgcatcgacatggagaacggattt
gagtgcctctgcctcccacagtgggctgggaagacctgccagatagacgctaatgagtgt
atggggaagccttgcctcaatgcttactcttgcaaaaacttgattggtggatatcactgt
gcctgctttcgaggatgggccggccagaactgtgacatcaatgtcaacagctgccatgga
cagtgtcagaatggagggatttgcaaggaggggcgaagaggctatgtgtgtgcctgctca
ctggggtttgtgggccggcattgtgagatccagaggaacagctgtgccagcgggccgtgt
aggaacgggggcaggtgccacaccctgctggacggcttcatgtgtgagtgcccacatggg
tacactggcaccacctgtgaggtgcagaacaacctgtgcagccctgacccatgccagaac
aaggcccagtgccacagtttgatggaagacttctactgtgcctgtcctgacgactatgag
ggcaagacctgctctgagctcaaggaccactgtaagaccaacccctgtgaagtgattgac
agttgtaccgtcgccgtggccaccaacgacacacaggaaggggtgtggcacatctcatcc
aatgtgtgcggcccacacggacgctgcatcagccagcctgctgggaacttcacctgctcc
tgtgaaccgggcttcactggaacatactgtcacgagaacataaacgactgtgtgccgcct
ccctgtaagaatggaggaacctgcattgacgggatcagctctttccagtgcttttgccct
gacggctgggagggcacgctgtgtgacatggatgtgaatgagtgcagtaggaacccctgt
aagaacggaggtcgctgtgtggacctgctcaacgatttctactgtcagtgccaggacaac
tggaaaggcaagacttgccactcacgtgagagccagtgtgattccagtacctgcagtaac
ggggggacgtgcttcgaccacggggacaccttccgctgtacctgtccctcagggtggcgg
ggcagcacctgtaatacagccaagaacagtacgtgtgactctaacccgtgtgagaatgga
gggacctgtgtcggagcaggtgatgcctacacctgcatctgcaaggatggctgggagggg
cccacatgtgctcagaatgctaatgactgcaaccctcaaccctgctataacgggggtgtc
tgtgtggatggcgtgaactggttccgctgtgagtgtgccccgggattcgccggaccagac
tgccggatcaacatagatgagtgccagtcatctccctgtgcctatggttctacctgtgtg
gatgagatcaacagcttcctctgtgtgtgtcccctgggccgggctgggcctcactgtcaa
gagttcatagggatcgggaaggcctgtcgttactctggcttgcaatttcctcacggcagt
cgatgggaggagaagtgtaatacctgccagtgtgtcaacggcaatgtgcgctgttctaag
gtacggtgtggccgacggccctgcctgctccggagaggtgctcccggtccagacagcagt
gccccgtgtcctggaggacaggaatgtgtggaacaccaattcctcacctgcttcgccaag
ccctgccaccagtggggcgtgtgttccacccccgacccccctctgcccctccacacccag
tgtgaacccaacagtggttacctggacaacagctgtgcccgcatcacactcatctttaac
agagacaaagttccacagggcaccactgtggagaacatctgctcggagctgaggtacctt
cccatcacccagaccctggctaaagaacgcacgctcctcattctctgtgacctgtcctac
tccaacagtgacgccgtggaggttgccatgtcgtatgatcaggatggtcaggagcggaat
ggagaccgtggtcagatccaggaggctgccagtgccatcgtcggtgccctgtccaaacgc
cacaacagcactgtcatgctggccgtggtggaggtcaaagtggagacgcaggtcatgccc
cagtctgtggaccacctggtgccagtgctgtgcgtggtgttcagtgtgctgtggatcttc
tgtatcgtggtgtgtgtgtggtggacccgtaagagaaagaaagagcgtgagagagagtct
gcagcggaggacagcaccgtcaacaaccagctggagccgctgagggtcagcctgccacag
cacaaagacaaccgagacaaagacattcagcacgaatgtaagaaactcatgagccctcca
gaccgaacgtgtgacggggctgaggaagaagaggaggaggacggagaggaggaggagctg
aggagaggagggatggagctagacaagtgctccacccaaaagtgctccttggcaggagtg
caggacaaaatgatggccaaagggggagtgatctgtacgatgcgtagcgcccctgtcaaa
ccaccccaccggacagcgtacagcccgaaagacaaccggtgtaaaaacctcagcgctgcc
aacgtcagcgaagatgtcaaagaccattatgtatga
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