Coregonus clupeaformis (lake whitefish): 121539364
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Entry
121539364 CDS
T08357
Symbol
esr2b
Name
(RefSeq) estrogen receptor 2b isoform X1
KO
K08551
estrogen receptor beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121539364 (esr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121539364 (esr2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121539364 (esr2b)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121539364 (esr2b)
Nuclear receptors [BR:
cclu03310
]
3. Estrogen like
3A. Estrogen receptor
121539364 (esr2b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
121539364
NCBI-ProteinID:
XP_041703729
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Position
25:5120452..5156054
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AA seq
639 aa
AA seq
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MACSPESGTDISSLLQLQDVGSSKAQERGSSPGLLPTLYSPPSGMEGRTFCIPSPYTDNS
HDYSHSHGPLAFYNPSMLGYSRPPISDSPSLCPPLSPSLFWPPHGHGQHNMPSLTLHCPQ
PLVYSEHNHHAPWVEPKPHGLSPSSPLLHPTKLLGKRLEDGEEVNSAPASCVVVKADMHF
CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRK
CYEVGMMKCGVRRERCSYRGARHRRVPQGRGAPGGLVGVGARAQMRLDGGSHPQLEVQHS
SLTPEQLISCIMEAEPPEIYLMEDLKKPFTEASMMMSLTNLADKELVLMISWAKKIPGFV
ELSLTDQVHLLECCWLEVLMLGLMWRSVDHPGKLIFSPDLKLNREEGNCVEGIMEIFDML
LAATSRFRELNLQREEYVCLKAMILLNSNICSTSPERAEDLESRRKLLRLLDSVTDALVW
AISKRGLSFQQQSSRLAHLLMLLSHIRHVSNKGMQHLSSMKKKNVVLLYDLLLEMLDANT
THSSRMSAPHDPSNNNPTEPPAAPALTQAPATAVDTQLQPQSLQLPFQNSEESQTLESSE
YIQPGCWPAERGEMCTSVRGTVTGDSVGQGDMDGDCLIL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcctgttctcctgagagtgggacagacatttcttccctgctccagctccaggatgtg
ggctccagcaaggcccaagagagggggagctccccgggactcctgcccaccctctacagc
cccccgagcggcatggagggccgtacattctgcatcccctctccctacacagacaacagc
catgattacagccacagccacggacccctagccttctacaacccctctatgcttggctac
agcagaccacctatctccgacagcccctctctatgtccccccctcagtccctctctcttc
tggcccccccatggccacggccagcacaacatgccctcgctgaccctgcactgcccccag
cccctggtgtacagtgagcataaccaccatgccccctgggtggagcctaaaccccacggc
ctcagccccagcagccctctactccaccctaccaagctgctggggaagagactggaggac
ggagaggaagtgaactccgccccagccagctgtgtggtggtgaaggcagacatgcacttc
tgtgccgtgtgtcatgactacgcttcgggctaccactacggtgtgtggtcttgtgagggc
tgcaaggcctttttcaagaggagcatccaaggccacaatgattatatttgtccagcgact
aaccagtgcactatcgacaagaaccgccgtaaaagctgccaggcctgccgcctacgcaag
tgttatgaagttggcatgatgaagtgtggtgtgaggcgagagcgctgcagttaccggggg
gcaaggcaccggcgtgtacctcaggggcggggggcgccaggcgggctggtgggggtaggg
gccagggcccagatgcgtctggatgggggctcccaccctcagctggaggtgcagcactcg
tccctgaccccagaacagctgatctcctgcatcatggaggcggagcccccagagatctac
ctgatggaggacctgaagaagcccttcactgaggccagcatgatgatgtcactcaccaac
ctggccgacaaggagttggtcctcatgatcagctgggccaagaagatccctggctttgta
gagctgagtctgacggaccaggtgcacctgttggagtgttgctggctggaggtgctgatg
ctgggtctgatgtggaggtctgtcgaccaccctgggaaactcatcttctcaccagaccta
aagctcaacagggaagaggggaactgtgtggagggcattatggagatatttgacatgctg
ctggcagccacctctaggttccgggagctgaaccttcagagggaggagtacgtctgtctg
aaagccatgattctcctcaactccaacatctgctctacctctccggagagggcagaggat
ctagagagcaggaggaagctgctgcgtctgctggactcagtgacagatgccctggtgtgg
gccatctccaaacgaggcctgtccttccagcagcagtcatcccgcctggcccacctcctc
atgctgctctcacacatccgccacgtcagtaacaaaggaatgcagcacctctctagcatg
aagaagaagaatgtcgtgctgctctatgacctgctcttggaaatgctggacgccaacaca
acccacagcagccgtatgtccgcacctcatgacccctctaacaacaaccccaccgagccc
ccagcagcaccagcccttacccaggctccagccactgctgtagacacccagctccagcca
caatccctacagctaccattccaaaactcagaggagagccaaacacttgagagcagtgag
tacatccagccagggtgctggccagccgagagaggagagatgtgtacctcagtgagagga
acagtgacaggagacagcgtgggacagggggacatggatggagactgcctgatactttaa
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