Coregonus clupeaformis (lake whitefish): 121539367
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Entry
121539367 CDS
T08357
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121539367
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
121539367
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
121539367
NCBI-ProteinID:
XP_041703736
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All DBs
Position
25:4867833..4924267
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AA seq
681 aa
AA seq
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MCSRVCKNCGGTDIDMDQARGDAVCMGCGSVLEDNVIVSEVQFMETGGGGSSAVGQFVAG
DASGRNPTFGEGFYTGIGRESRAQTLQNGRRQINTLGHQLQLNQHCLDTAFNFYKMAVCK
HLTRGRRVAHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLILARELCINAPA
IDPCLYIPRFAHMLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTIKEIISVVKVCEATLRKRLNEFEDTPTSQLTIEEFMKVDLDQECDPPSFIAGQRK
KRMKLLEEELEKKIGDVQGEIHEYQDEIEMELEQSRTKLRGMYGSYAKADPQEKEEDDDD
DEISLPDGEDEELKAVAQHLNKDLCDQVLSGEEEEGDGERQKERPPRRGPSLVSLLGPMP
TAASLGLPESISKCIGEEKENDGDTENGELDLSGIDDDEIQLYLLNDKEVKIKTELWMKQ
NEDYLKEQKEKEERIVKEKELGIYKEKPKSSGYKKKALIHASTADEAIEKMLEQKKISTK
INYDILKELNIKPSTSPARQTAESPKGATPGAQRLTGRYRKPTNVPLSLGTPLSTLGKRF
SCLRLRPFISAQPHKKLALDQIANPLPVVSETAPHSVLVESGPVIYDDVGDEEEEDEEEP
CVSAMQLLGGNEYGCDDDDGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtgttccagagtgtgtaagaactgtgggggcacagacatcgatatggaccaggccagg
ggtgatgccgtgtgcatgggctgtggctctgtcctggaggacaacgtcattgtgtctgag
gtccagttcatggagactggagggggaggctcctcggctgtgggacagttcgtagctgga
gacgcctctggaaggaaccccacttttggagaagggttctatacaggcattggaagggag
tcccgggcccagaccctgcagaacgggagacgtcagatcaacacgctgggccaccagctg
cagctgaaccagcactgcctggacacggccttcaacttctacaagatggccgtgtgtaaa
cacctgacaaggggccgaagggtggcccacgtggtggctgcatgcctctacctggtctgc
aggacagaggggacacctcacatgctgcttgacctcagcgacctcctgcaggtaaatgtt
tatgtcctgggtagaacctttctgatcctggccagagagctctgcatcaacgcccccgcc
atagacccctgcctgtacatccctcgctttgctcacatgctggagtttggggagaagaac
catgaggtgtccatgacagcactgagactgctgcagaggatgaagagggactggatgcac
actggacggaggccctcaggactgtgtggcgcagcactgttggtcgctgctcgcatgcac
gagttccgccgtaccatcaaagaaatcatcagtgtagtgaaggtgtgcgaggccacacta
agaaagaggttgaatgagtttgaggacacgcccaccagtcagctgaccattgaggagttc
atgaaagtggatcttgaccaggaatgtgacccgccctctttcatcgctggccagaggaag
aaaagaatgaagctgcttgaggaagaattggagaagaagattggcgatgttcaaggcgag
atccatgagtaccaggatgagattgagatggagctggagcagagccggaccaagttgaga
gggatgtatggctcctatgcaaaagccgatccccaggaaaaagaggaggatgatgatgat
gatgaaatatctcttcctgatggggaggacgaggagctgaaggctgtggcccagcacctc
aacaaggacctgtgtgaccaggttctctctggcgaggaggaggaaggggatggagagagg
cagaaggaaagacctccacgcagaggcccatcgctggtctccctcctagggcccatgccc
accgcagccagcctgggcctcccagagtccatcagcaagtgcatcggagaggagaaggag
aacgatggggacactgaaaatggagagctcgacttgagcggtattgatgatgatgagatt
cagctgtatctcctgaatgacaaagaggtgaaaatcaagactgagctttggatgaaacag
aacgaagactacttgaaagagcagaaagaaaaggaagagaggatagtgaaagagaaggag
ctggggatttacaaggagaagcccaagagttctggctacaagaagaaggctctgatccat
gccagcacggccgacgaggctatagagaagatgctggaacagaagaaaatttccactaag
atcaactacgacatcctgaaggagctgaacattaagcccagcaccagtccagcccgccag
acagcagagtccccgaaaggagccacccctggagcccagaggctgactggacgataccgc
aaacccaccaacgtccctctgagcctgggcacaccactcagcaccttgggcaagaggttt
tcttgtctcaggttacggcccttcatatcagcacagccccataagaagctggctctggac
cagatagccaaccccctgccagtggtctctgagacggcgccccactctgtgctggtagag
agtgggcctgtgatctatgatgatgtgggagatgaggaagaggaggatgaggaagagccc
tgcgtcagcgccatgcagctgttgggaggcaacgagtatgggtgtgatgacgatgatgga
ttctag
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