Coregonus clupeaformis (lake whitefish): 121539399
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Entry
121539399 CDS
T08357
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121539399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121539399
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121539399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank
PH
Ank_2
SH3_9
Ank_4
SH3_1
Ank_5
SH3_2
Ank_3
PH_9
NPFF
STN1_2
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
121539399
NCBI-ProteinID:
XP_041703809
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MPDQITVSEFMAETNEDYKAPTASNFTTRMSHCRNTVTALEEALDVDRSVLYKMKKSVKA
IYTSGLAHVENEDQYTQALEKFGENCVYRDDPDLGSAFLKFSVFTKELTALFKNLFQNMN
NIITFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKATKIEKEKKEHARQHGMIRTEISG
AEIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKTVDN
LKPSIEKLATDLHTIKQAQDEERKQLTQLRDVLKSALQVEQKESRRESQVRQSTTYSLHQ
PQGNKEHGTERCGNLYKKSDGLRKVWQKRKCSVKNGYLTISHGTANRPPAKLNLLTCQVK
HNPEEKKSFDLISHDRTYHFQTEDDPECQIWISVLQNSKEEALNNAFKGDQHVGENNIVQ
ELTKAILGEVKRMTGNDVCCDCRAPNPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLT
LDVLSTSELLLAKNVGNAGFNEIMEACLSVEDVVKPNPASDMQVRKDFITAKYTEKRFAR
RKCPDGASKLHTLCDAVKARDIFSLIQVYAEGVDLMEPIPLANGHEQGETALHLAVRLVD
RTSLHIVDFLTQNSVNLDKQTAKGSTALHYCCLTDNMECLKLLLRGKASIDIATESGETP
LDIAKRLKHLQCEELLNMALAGKFNAHVHVEYEWRLHHDDMDESDEDMDEKVRPSPHRRE
ERPVSCYTPGSNAHFQPSPARDKQRGGYMPNLVTNETYGAILNASPPAPGGPATISAPPL
PPRNIVQMSGLCGMVQSSGSSGWKPGSIDLGGRQRSSSDPPNMHLPVPPMRFTSTTGLAP
PPVAKTVSVMDAMNQQSKPGTGQGHNRAPPPKSPSGNAKSFSKGPTRTGSIERPAKEVPG
CPQNSMGQSLPPAPMPRKTYPKHRPKRVKAIYNCMADNPDELTFSEGEVIVVDGEEDQEW
WLGHIEGEPMRRGAFPVTFIHFIMD
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgccggaccaaattacagtgtccgagttcatggcggagacaaatgaagattataaagcg
ccaacggcttcaaacttcactactagaatgtcccactgtaggaataccgtgactgctttg
gaggaggcgctggatgtggaccgcagcgtgctgtacaagatgaagaagtcagtcaaggcc
atatacacctcaggtctggcccatgtggagaatgaggatcagtacacccaggccctcgag
aagtttggggagaactgtgtctacagggacgaccccgacctgggctctgccttcctcaag
ttctctgtcttcaccaaggagctcaccgccctcttcaaaaacctgttccagaacatgaac
aacatcatcaccttccctctggacagcctgctgaaaggtgacctgaaaggagtcaaaggg
gacctgaaaaaaccttttgataaggcctggaaagactacgaaacaaaagccactaagatc
gagaaggagaagaaggagcatgcgcggcagcatggcatgatccgcactgagatcagcggg
gcagagatagcagaggagatggagaaggagaggaggttcttccagctgcagatgtgtgag
tatcttcttaaagtgaatgagatcaagatcaagaaaggggtggacctactccagaatctc
atcaaatatttccatgcacagtgcaatttctttcaggatgggctgaagacagtagacaac
ctcaaaccctccatagagaagctagccacagacttacacacgataaagcaggcccaggac
gaggagaggaagcagctcactcagctacgggacgtcctcaagtcagcgctacaggtggag
cagaaggagtctaggagagagtcccaggttcgacagagcaccacctacagtttgcaccag
cctcagggcaacaaggagcacggtaccgagcgctgtgggaacctctacaagaagagtgac
gggctaaggaaagtgtggcagaagagaaagtgttcagtaaagaacggataccttaccata
tcacatgggacggcgaaccgaccgccagccaaactcaacctcctcacctgccaggtgaaa
cacaacccagaggagaagaagagctttgacctcatctcacatgacagaacgtatcacttt
cagaccgaggatgacccagaatgtcagatctggatctctgtgctgcagaacagtaaggag
gaagcgttgaataatgcctttaagggagaccagcacgttggggagaacaacatcgtccag
gagctgaccaaggccatcctgggtgaggttaagaggatgaccggcaacgacgtctgctgc
gactgcagagcgcccaatcccacgtggctctccactaacctgggcatcctgacgtgtata
gagtgttctgggatccacagggagctgggagtccactactccaggatccagtccctcaca
ctggacgtcctcagcacctccgaactcttgctggccaagaacgtggggaatgcaggcttt
aacgagatcatggaggcttgtctatctgtggaggacgtggtcaaacccaaccctgccagt
gacatgcaagtccgtaaggacttcatcacagccaagtacacagagaagcgtttcgccaga
aggaagtgtccagacggggcatccaagctgcacacgctctgtgacgcagtcaaagcccgg
gacatcttctctctgatccaggtgtatgctgagggagtggacctgatggagcccatcccc
ctggccaacggacacgaacaaggtgaaacggcccttcacctagcggtcagactagtggac
aggacctcactccatatcgtcgacttcctcactcaaaacagtgtgaacctggacaagcag
acagccaaaggcagtacggccctacactactgctgcctgactgacaacatggagtgtctc
aaactgctactgcggggcaaggcctccattgacatagccactgagtctggggagacgccg
ctggacatcgctaagagactgaagcacctgcagtgtgaggagctgctgaacatggcgctg
gcggggaagttcaacgcccatgtgcacgtagagtacgagtggcgtctgcaccatgacgac
atggacgagagtgatgaggacatggatgagaaggtgaggcccagcccccaccggagagag
gagcgccctgtcagctgctacacccctggctccaacgcccacttccagcccagcccggca
cgggacaagcagcgtggtgggtacatgcccaacctagtcaccaacgagacctatggtgcc
atcctcaacgccagcccccctgcgccaggggggcccgccaccatctctgcaccccctctg
cccccacgaaacatagtccagatgtcaggtctgtgtgggatggtccagtcatcagggtcc
tctgggtggaagcctggctctatagacctggggggccgacagaggtcctcctcagacccc
cccaacatgcacctcccggtaccccccatgcggttcacctcaaccactggtcttgctcct
ccccccgtggccaagacagtgagtgtgatggacgctatgaaccagcagtctaaaccaggg
accggacagggccacaacagagccccaccacccaagtctccatctggcaacgccaaaagc
ttcagcaaaggaccgactcgaacggggtccattgaaagaccagctaaggaagtgccggga
tgcccccagaactcgatgggtcaatcgctgcctcctgcccccatgcctaggaagacctat
ccgaagcataggcccaagcgggtaaaggccatctataactgtatggcagacaacccagac
gagctgaccttctcagagggggaggtgattgtggtggacggggaggaggaccaggagtgg
tggctgggccacatcgaaggagaaccaatgaggaggggggctttccccgtcacgttcata
cacttcatcatggactga
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integrated database retrieval system
