Coregonus clupeaformis (lake whitefish): 121539428
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Entry
121539428 CDS
T08357
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121539428 (gabrg1)
04082 Neuroactive ligand signaling
121539428 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121539428 (gabrg1)
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121539428 (gabrg1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121539428
NCBI-ProteinID:
XP_041703856
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Position
25:complement(23271694..23280334)
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AA seq
469 aa
AA seq
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MNCGISAICAKLLLQDVKGKAMNAWLLLALLGVCVASFGPSTKEDEDYEDVPINKTWVLS
PKVYESDVTLILNRLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFA
QTWYDSRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWNNGRV
MYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEILYRWQKRSVEVADQRYWRLY
QFAFVGLRNTSDVAHTQSGEYVILTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINK
DAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHY
FTSNRQSKKDTDKNAPQKSSSMVNIRPGTSLLQMNNIAPYQDEDDYAYECLDGKDCTSFF
CCFDDCRSGAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgggatttccgcaatatgtgccaagcttctgctgcaagatgtcaaaggcaaa
gcgatgaatgcgtggctgttgctagctcttctcggagtctgtgtggcgtcatttgggccc
agtacaaaggaggatgaggactatgaagacgtccccataaataagacctgggttttatcg
cccaaggtctatgagagcgatgtcaccttgatcttaaatagattgctgcagggctatgac
aacaaactccgacctgacattggagtaaggcccaccgtgattgagacagcggtatatgtc
aacagcatcggaccagtcgatcctattaacatggagtacaccatagacatcttctttgcc
cagacgtggtatgacagtcgccttaagttcaacagctccatgaaagtcctgatgctcaac
agtaacatggtgggaaagatctggattcctgacacctttttccgaaattctagaaagtct
gacgcccactggatcaccactccgaaccgtctgctacgactgtggaacaacgggagagtg
atgtacacgctgaggttgactattaatgcggaatgctaccttaagctgcataactttcct
atggacgagcactcgtgtccgctggagttttcgagctatggctatccaaaaaatgagatt
ctgtaccgttggcaaaagcgttctgtggaagtggccgaccaaaggtactggagactctac
cagtttgcgttcgtcggtttacgaaacacatcagacgtggcgcatacacagtcaggtgaa
tatgtcatcttgacaatattttttgacctgagtcggcgaatgggctacttcactattcag
acgtacatcccctgcagcatgatcgtggtgctgtcatgggtctctttttggatcaacaaa
gatgctgtccctgccaggacctccttgggaatcaccacggtgcttaccatgacaacgctg
agcaccatctccaggaagtcacttcccaaggtgtcctatgtgacggccatggacctgttt
gtgtctgtttgcttcatcttcacgtttgctgctctgatggagtatgggactctacactac
ttcaccagcaacaggcagagcaagaaggatacggacaaaaatgcaccacagaaatccagc
agcatggtgaacattaggccagggacgtcactgctccagatgaataacattgccccctac
caagacgaggacgattatgcctatgagtgtctggatgggaaggactgcaccagcttcttc
tgctgcttcgacgactgtcgctccggagcatggcgtgaaaatcggatgcatgtccgagtc
tcaaagatcgattcctactcacgaatattcttccccaccgcctttggccttttcaacctg
gtctactggatcgggtatctgtacttataa
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