Coregonus clupeaformis (lake whitefish): 121539441
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Entry
121539441 CDS
T08357
Name
(RefSeq) growth/differentiation factor 6-A-like
KO
K20013
growth differentiation factor 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121539441
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121539441
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121539441
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121539441
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Vir1p
Motif
Other DBs
NCBI-GeneID:
121539441
NCBI-ProteinID:
XP_041703875
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Position
25:23873917..23879982
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AA seq
445 aa
AA seq
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MDPIRSAAPLLWLSLCFGNILEAAVLGSLQYPSGADDNGLVSHLDERSRREPTAVSRKDP
PINDTIVPHDYMVSLYRTLSEIESRGFNSSVPRTARHANTVTSFVDQGKDHSSWGSGQRY
LFDLSSLSRTDELVEAELRILRKPPLDLLPVLTWGRNLYRLLLYTCSSEGNSGRRLLDSR
TVDVLDGEPPKWDVFDVWASVKARRRSHKTAAGNDLLMACFDLLVVSELTKEAANPLTVG
LGRQSRQPQERALLLAFSRTRRKENLFKEIREQMKAVQRDMGFLDPLDLSGDVVGHLSRR
RRRRTALTSRSVGGAGGGGGGGGGAGGGGGGRGGGGSGRRKTRCSRRQLHVNFKELGWDD
WIIAPLDYEAHHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPDSSPPSCCVPSKLSPISI
LYIDSGNNVVYKQYEDMVVESCGCR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggatcctattaggtctgctgctcctttgctatggctttccctgtgctttgggaatatt
ctggaggcagcggtacttggatcattgcagtacccctccggtgcggatgataacgggctt
gtttcacatctggatgagcggagtcgcagagagccgacagcggtgtccaggaaagaccct
ccgataaatgatactatcgtcccccatgactatatggtatctctatacaggacactatct
gagatagagagcagagggtttaacagcagtgttcctcgcaccgcaagacacgccaacacg
gtgaccagtttcgtggatcaaggaaaagatcactcctcctggggaagtggccagcgctat
ctcttcgacctctccagcctgtccagaacagatgagcttgtggaggcagaactgaggatc
ctgagaaagccaccgctggatctccttcctgtgctgacgtggggcaggaatctttatcgc
ctcctcctctacacatgttcgtctgaggggaactctgggagacggctgctggattccagg
acagtcgacgttctggatggcgagcctcccaaatgggatgtatttgatgtgtgggcaagt
gtgaaggctcggcgaaggagccacaagacagcagcaggcaacgacctcctcatggcctgc
tttgacctgctggtcgtttcggagttgaccaaagaggcagccaaccctcttacagtaggg
ctgggacgccagtctcggcagccccaggagagggccttgctgttggctttttctcgcacc
cgcaggaaagagaacctgttcaaggagattagggagcagatgaaggcagtgcaaagagat
atgggttttctggatcctttggacctctctggtgacgtggttggtcacctatccaggcga
cgcagacgccggactgccctgaccagcagatctgtaggtggagctggtgggggaggagga
ggaggcggtggtgctggaggaggtggaggaggaaggggtggtggaggcagcgggcgcagg
aagactcgatgcagccgcaggcagctccatgtcaacttcaaggagttgggctgggatgac
tggatcatcgcaccgctggattatgaggcgcaccattgtgagggcgtgtgtgacttcccg
ctgcgctcacacctggagcctacaaatcacgccatcattcagacacttatgaactctatg
gaccctgactccagcccgcccagctgctgtgtcccctccaaactcagccccatcagcatc
ctctacattgactctggcaacaatgtggtctacaagcagtatgaggacatggtggtggag
agctgcggctgcaggtag
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