Coregonus clupeaformis (lake whitefish): 121539445
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Entry
121539445 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04382
Cornified envelope formation
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121539445
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121539445
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121539445
09158 Development and regeneration
04382 Cornified envelope formation
121539445
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121539445
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121539445
03036 Chromosome and associated proteins [BR:
cclu03036
]
121539445
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121539445
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121539445
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121539445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
DSE1_N
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
121539445
NCBI-ProteinID:
XP_041703882
LinkDB
All DBs
Position
3
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYLFRPPTTILSSTCHTEADIISTVEFNPSGELLATGDKGGRVVVFQREQET
KSEPQRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNTAYFLLSTNDKTVKL
WKISERDRRPEGYNLKDEDGRIRDPSTITSLRVPVLQPTDLMVEATARRVFSNAHTYHIN
SISVNSDLQTYISTDDLRVNLWNLEITDQSFNIVDIKPGNMEDLTEVITAAEFHPQQCNT
LAYSSSRGSVRLCDMRKQALCDTHCKFFEEPEDPSTRSFFSEIISSISDIKFSHSGRFLM
TRDYLTVKVWDLNMETRPVQTYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKKDVTLEASRENSKPRAILKPRKVCVGGKRRKDEVTVDSLDFSKKILH
SAWHPQENIIAVAASNNLYIFQDKVT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttatctcccgtacctcttccgccctcctaccaccatcctgtct
tccacatgccacaccgaagctgacatcatctccaccgtggagtttaacccttcgggggag
ctgctggccacaggggacaaaggaggaagagtggtggtcttccagagagagcaggagact
aaaagcgagccccagaggcgaggggagtataatgtttacagtacgttccagagtcatgag
ccagagtttgactacctgaagagtctggagatagaggagaagatcaacaagatacgatgg
ctgcctcagcagaacactgcttacttcctcctctccaccaacgataagacagtgaagctc
tggaagatcagtgagagagacagacgaccagagggatacaacctgaaggatgaagatgga
cgaatcagagacccatctacaatcacctcactacgggtgcctgtcctccagcccacagat
ctgatggtggaggcgacagcgcggcgtgtgttcagtaacgcccacacctaccacatcaac
tccatctccgtgaactctgacctccagacctacatttccaccgacgacctcagggtcaac
ctgtggaacctggagatcaccgaccagagcttcaacattgtggacattaagccgggtaac
atggaggatctgacggaggtgattacagcagcagagttccatcctcagcagtgcaacacc
ttggcctacagcagcagtagagggtcagtacgactctgtgacatgaggaaacaggcgctc
tgcgacacacactgcaagttctttgaggagccagaggacccctccactcgttcatttttc
tccgagataatctcttccatctcagacatcaagtttagtcatagcgggcgcttcctgatg
acacgggactacctgacagtcaaggtctgggacctcaacatggagaccagaccggtccag
acataccaggtccatgactacctgaggggtaagctgtgttctctgtatgagaacgactgc
atcttcgacaagtttgagtgtgtctggaatgggtcagacagtgtcataatgacggggtcg
tataataatttcttccggatgtttgatcggaacaccaagaaagatgtgaccctggaggct
tccagagagaacagcaaaccccgggccatcctcaaaccacgcaaggtgtgtgtgggaggg
aagcgtcgtaaagacgaggtcactgttgacagtctggacttcagtaagaagatcctccac
tccgcctggcacccacaggaaaacatcatcgctgtggcagccagtaacaacctctacatc
ttccaggacaaggtcacctag
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