Coregonus clupeaformis (lake whitefish): 121539446
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Entry
121539446 CDS
T08357
Name
(RefSeq) 26S proteasome regulatory subunit 10B isoform X1
KO
K03064
26S proteasome regulatory subunit T4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121539446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121539446
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121539446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_16
AAA_2
AAA_22
AAA_5
RuvB_N
PRS7_OB
nSTAND3
AAA_14
DUF815
AAA_7
AAA_33
AAA_11
Prot_ATP_ID_OB_N
NPHP3_N
RNA_helicase
AAA_3
bpMoxR
TIP49
Mg_chelatase
AAA_18
AAA_24
AAA_28
TsaE
NACHT
DUF5906
ATPase
AAA_25
Csa3_N
AAA_17
IstB_IS21
ATPase_2
Parvo_NS1
GAS
HFX_2341_N
DUF3829_2nd
Motif
Other DBs
NCBI-GeneID:
121539446
NCBI-ProteinID:
XP_041703879
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All DBs
Position
25:complement(24114238..24129597)
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AA seq
331 aa
AA seq
DB search
MADPRDKGHQDYRKKLLEHKEIDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEI
LKQLTEEKFIVKATNGPRYVVGCRRQLDKAMLKPGTRVTLDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLAEQIRELREVIELPLTNPELFLRVGIIPPQGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARMDILKIHSGPITKHGEMGEFRD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcccagagacaagggacatcaagattacagaaagaaattgcttgagcacaaa
gaaattgatggacgcctgaaagaattgcgtgaacagctgagagaacagacaaaacagtat
gaaaaatccgaaaatgatctgaaagctctacaaagtgttggacagattgttggtgagatc
ctaaagcagctaacagaggagaaattcattgtcaaagcaaccaatggcccacgatatgtg
gttggatgcagacggcagctggacaaggctatgctcaaacctggtactagagttacattg
gatatgaccactctgactatcatgaggtaccttcccagagaggtggacccccttgtgtac
aacatgtctcatgaagaccctggcagcgtctcctactctgagattggaggcttggctgag
cagatcagagaactcagagaggtgattgagctgcctctgaccaaccctgagctcttcctg
agggtgggcatcatccctcctcaaggctgcctgctatacggacccccaggaaccggaaag
acacttttggccagagcagttgctagccagcttgactgcaattttctgaaggtggtgtcc
agctccatagtggacaagtacattggtgagagcgctaggctgatccgagagatgttcaac
tatgccagggaccaccagccctgcatcatcttcatggatgagatcgatgccataggtggt
cgtcgtttctctgaggggacgtctgcagacagagaaatccagaggacactgatggagctg
ctgaaccaaatggatggctttgacaccctgcacagagtgaagatgatcatggccaccaac
cgtccggacacgctggaccctgcccttctaaggccagggagactggaccgcaagatccac
atcgagctgcccaatgagcaggctcggatggacattctgaagatacactctgggccaatc
actaagcatggagagatgggcgagtttagggactag
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