Coregonus clupeaformis (lake whitefish): 121539454 Help Entry 121539454         CDS       T08357                                  Symbol aqr Name (RefSeq) RNA helicase aquarius   KO K12874   intron-binding protein aquarius Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03040   Spliceosome Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     121539454 (aqr)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cclu03041]     121539454 (aqr) Spliceosome [BR:cclu03041]  Complex B   Other components    Prp19-related factors     121539454 (aqr)  Complex C     121539454 (aqr) SSDB OrthologParalogGFIT Motif Pfam:  Aquarius_N_1st Aquarius_N_2nd AAA_11 AAA_12 Aquarius_N_3rd AAA_19 ResIII AAA_30 DEAD UvrD-helicase AAA_16 Parvo_NS1 UvrD_C_2 AAA SLFN-g3_helicase AAA_22 PhoH DnaB_C RecA_N nSTAND3 NB-ARC Raptor_N Motif Other DBs NCBI-GeneID:  121539454 NCBI-ProteinID:  XP_041703894 LinkDB All DBs Position 25 Genome browser AA seq 1498 aa AA seqDB search MRSGNHTHVLKQHGKQASQLNTDMENQTHAKKASAPSVSQINAEYVTQLANRYWAPHAKN KLPFDPKVLEDVYEKEILKSKFAIRKIMLLEFSQYLENYLWVNYNPEVSSNAYLMSICCI VNEKFRENVPAWEVFKKEPTHFPYFFKCVMEAVLAGEEAGLTLKEQTVLLVFLDHCFNSL EVDLIREQVQQLISLPMWMCLLPSRLQHELKKVPKLQKFWNLIKKNFDKLEDKASEQAKM ERTFLSALIKKFLGVLMSISPAGPVPMEKVHYCERFIELMIDLEALLPTRRWFNTVLDDS HLVVSCHLSILMQREKEGHLFCQLLDMLKFYTGFEINDQTGNALTEKEMTTLHYDRITSL QRAAFAHFPELQDFALSNVAAVDTRESLTKQFGHLSSNTLHRVASYLCLLPELADGQDTT YEKEVLLELLVSRHERRISQIEQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNL QFLTLHDYLLRNFNLFRLESTYEIRQDVEDVVTRMKPWQSEYGGVVFGGWARMAQTITAF SIVEVAKPNIGENWPARVRADITVNLNVRDHIKHEWEGLRKHDVCFLVTVRPNLPYGTRF DRRQPFVEQTGLAYVRGCEVQGMLDDKGRVIEEGPDPKPKLRGDTRTFRVWLDPNQYQQD MTSNIQNATEDPYESFNIIMRRKPKENNFKAVLETIRNLMNTECVVPEWLHDIILGYGDP GSAHYSKMPNQISSLDFNDTFLSIDHLRSCFPGYTVKVTEDNPKLQIPPFRIKFPVQNKA DKGKKRKADSEEEKKEEEKMLIVEPHVTPNRGPYPYNQPKRNTIQFTPTQIEAIRAGMQP GLTMVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIIALDIDERHL LRMGHGEEALETEKDFSRYGRVNYVLARRLELLSEVGRLQESLDVPGDVSYTCETAGHFY LYQVMSRWEEYMSKVRSKQGCPVEAEAVAAHFPFHKYFSNAPQPVFYGRSYEEDMDIAEG CYRHIKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKY DNILMEEAAQILEIETFIPLLLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNME QSLFTRFVRLGVPTVDLDAQGRARASLCNLYNWRYKQLGNLPHVQLLPQFQAPNPGLTFD FQLINVEDFNGVGESEPNPYFYQNLGEAEYCVALFMYMRLLGYPADRISILTTYNGQKHL IRDVINQRCAGNPFFGQPNKVTTVDRFQGQQNDYIILSLVRTRAVGHLRDVRRLVVAMSR SRLGLYIFGRVSLFQNCFELTPAFNQLTARPLKLHIRPNEYYTQGQPREPRSSQPDQVIK NMPEMANLVYNMYMHMIQSTQQYRQQQQKLLPPPRQTQAEAAVQADEDQAETPVEVENQE ETPMEQECSGEAGTEKTPQETPEKGDQEKVPEEHPKMPEHPGRDSDSDGEDSDDAEAS NT seq 4497 nt NT seq  +upstreamnt  +downstreamnt atgcgtagcgggaatcacacacatgttttgaaacaacacggaaagcaagctagccagctg aataccgacatggagaatcaaacccatgctaagaaagcatctgcgccctctgtgtcccaa atcaacgcagaatatgtcacacagttggctaacagatactgggcgccccatgccaagaat aaactaccttttgacccaaaggtcttggaggatgtctatgagaaagagattctcaagtcc aagttcgccattaggaagatcatgttgttggagttcagtcagtacctggagaactacctg tgggtgaactataatcctgaggtctccagtaatgcctacctcatgtccatctgctgcata gtcaatgagaagttcagagagaacgtccctgcctgggaggtgtttaagaaggagccaacg cacttcccgtacttctttaagtgtgtgatggaggccgtgctggctggagaggaggctggc ctgactctgaaggagcagactgtactgttggttttcctcgaccactgcttcaacagcctg gaggtggatttgattagagagcaggtgcagcagctaatctcactgcccatgtggatgtgt ctcttaccttctagactgcaacatgagctgaagaaagttcccaagctccaaaagttttgg aatctgatcaagaagaattttgacaagctggaagacaaagcttcagagcaagctaagatg gagaggacgttcctctctgcgctcattaagaagtttctgggtgttctgatgtccatctcc ccagcaggccctgtacccatggagaaggtgcactactgcgagaggttcatcgagctcatg attgacctggaggccctgctgcccaccaggcgctggttcaacacggtgctggacgactcc cacctggtggtgagctgccacctgtccatcctcatgcagagagagaaggagggacacctc ttctgccagttactggacatgctgaagttctacacaggctttgagatcaacgaccagacg ggcaacgccctgacagagaaggagatgaccacgctccactatgacagaatcacatcactg cagagggcagcctttgcccatttcccggagctgcaggactttgccctgtccaatgtggca gcagtggacacacgggaatcccttacaaaacagtttggccatctcagttccaacactctc caccgggtggcctcgtatctatgcctcttaccagagctggcagatggacaggacaccacc tatgagaaggaggttctcctggagctgctggtgtctcgtcatgagaggagaatctcccag atcgagcaacttaatcagatgcctctttatccaacagagaagattatctgggatgagaac atcgtccccactgagtactattctggcgaaggttgtctggctctgcctaagttgaacctg cagttcctgaccctccacgactacctgctgagaaacttcaacctgttccgtctggagtcc acctacgagatcagacaggatgtggaggacgtggtgactcgcatgaaaccatggcagtca gagtatggtggtgtggtgtttgggggctgggccaggatggctcagaccatcacagccttc tccattgtggaggtggccaagcccaacatcggagagaactggcccgcccgcgtccgagct gacatcactgtgaatctcaacgtacgagaccacatcaaacacgagtgggaagggctgcgt aagcacgatgtttgctttctggtcacggtgcggccgaacctgccctacggcacacgcttc gaccggcgccagccctttgtggagcagacaggcctggcctacgtgaggggctgcgaggtg cagggcatgctggacgacaagggccgtgtcatagaggaaggccctgaccccaagcccaaa ctgagaggagacaccaggacgttcagagtgtggctggaccctaaccagtaccagcaggat atgaccagcaacatccagaacgccactgaggacccctacgagtccttcaacatcatcatg agacgcaagcccaaagagaacaacttcaaggctgtcctggagacgatcagaaacctgatg aacactgagtgtgtggtcccagaatggctccatgacatcatcctgggctatggcgacccg ggatccgcccactactccaagatgcccaatcagatctcctcccttgacttcaatgacacc ttcctgtcgatcgaccacctgaggtcctgtttccctggttacaccgtcaaagtcactgag gacaaccccaagctgcagataccccccttcagaatcaagttccctgtgcagaacaaggca gacaaaggcaagaagaggaaggcagactctgaggaggagaaaaaggaggaagaaaaaatg cttatagtggagcctcacgtcacgcccaaccgggggccctacccctacaaccagcccaaa cgaaataccatccagtttacaccaactcagattgaggccatccgtgctgggatgcagcct ggactgactatggtggtgggtcctccaggtacaggaaagaccgatgtggccgtccagatc atctccaacctctaccacaacttccctgagcagagaaccctcatagtcacacactccaac caggctctgaaccagctgtttgagaagatcatagctctggacatagacgagcgtcacctc ctacgtatgggccacggagaggaggcactggagactgagaaggacttcagcaggtatggg cgtgtgaactacgtgctggcaaggaggctggagctgctcagtgaggttggtcgtctgcag gagagtctggacgtccccggagacgtgtcctacacctgtgagaccgccggacacttctac ctctaccaggtgatgtctcgctgggaagagtacatgagcaaggtcaggtctaagcagggc tgtccagtggaggccgaggccgtggcagcacacttccccttccacaagtacttctccaac gccccccagcctgtgttctacggtcgctcctacgaagaagacatggacatcgcagagggc tgctaccgacatatcaagaagatctttacccagctggaggagttccgagccttcgagctg ctgaggagtggactggaccgttccaagtatctgctagtgaaggaggctaagatcatcgct atgacctgcacccacgctgccctcaaacgccatgacctggtggagttgggcttcaagtac gacaacatcctgatggaggaagcagctcagatcctggagattgagaccttcatccctctc ctgctgcagaacccagaggatggttacagcaggctgaagcgttggatcatgataggagac caccaccagctgccccccgtcattaagaacatggccttccagaagtactccaacatggag cagtccctcttcacccgcttcgtacgcctaggggtgcccaccgttgacctggacgcccag ggacgtgcccgcgccagtctgtgtaacctgtataactggcgctataagcagctggggaac ctaccccacgtacagctcttgccccagttccaggcccccaaccctggcctgaccttcgac ttccagctaatcaatgtggaggacttcaacggtgtgggagagtcagagcccaacccttac ttctaccagaacctgggtgaggcagagtactgtgtggctctgttcatgtacatgcgtctg ctgggttaccctgccgacaggatcagcatcctcaccacctacaatggacagaaacaccta atcagagacgtcatcaaccagcgctgtgctgggaaccccttctttggacagcccaacaag gtgacgacggtggacaggtttcagggtcagcagaatgactacatcatcctctcactggtc cgcaccagagctgtgggacatctgagggatgtgaggcggttggtggtagccatgtccagg tccaggcttggcctgtacatctttggacgggtcagtctgttccagaactgctttgagctg actcctgccttcaatcagctcactgccagacccttgaagctccacatcagacccaacgaa tactacacacagggacagcctagagagcctcgctcgtcccagcccgaccaggtgatcaag aacatgccggagatggccaacctggtctacaacatgtacatgcacatgatccagagcacc cagcagtacagacagcaacagcagaagctcctgcctccccctcggcagacccaggcagag gcagctgtccaggcagacgaggaccaagctgagaccccagttgaagtggagaaccaggaa gagaccccgatggagcaggagtgctcaggggaggccggcacagagaagaccccacaggag acaccagagaagggcgaccaagagaaggtgccagaggagcaccccaaaatgcccgagcac cctggccgagatagcgacagtgatggagaggatagtgatgatgcagaagcatcttag

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