Coregonus clupeaformis (lake whitefish): 121539471
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Entry
121539471 CDS
T08357
Name
(RefSeq) vesicle transport protein SEC20-like
KO
K08497
protein transport protein SEC20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121539471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121539471
Membrane trafficking [BR:
cclu04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
121539471
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
PIN_9
Motif
Other DBs
NCBI-GeneID:
121539471
NCBI-ProteinID:
XP_041703929
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All DBs
Position
3:5095313..5118583
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AA seq
228 aa
AA seq
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MASSDVHVRVCEQEIIKYDLEIKALVQDVNECTGPHVKLTELNAKVKAKFNNLRLRIQDL
DQMGREQDKESVKMALLSEVERHRKQMLSNQTAWRKANLASKLSLDNLEKESLLYGGDSE
LRQRKVTKEGLAQTSSDITESLMSISRMMSQQVTQSEETMTTLATSSQAVVETNDEFKAM
TGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVFYILKKRFFFFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctctgatgtccacgtccgagtatgcgagcaagaaatcatcaaatatgacttg
gaaataaaagctctcgtgcaggatgtcaatgagtgtacaggaccacacgtcaagctgaca
gagttgaatgccaaagtgaaagcaaaattcaacaaccttaggctacggattcaggaccta
gatcagatggggagggagcaggacaaggagtcagtcaagatggctctactcagtgaggtg
gagagacaccgcaagcagatgctcagtaaccagacagcatggaggaaggccaacctggcc
agtaaactgtccctagacaatctggagaaggaatctcttctctatggaggagatagtgaa
cttagacaaaggaaggttaccaaagaggggctggcccagacgtccagtgacatcactgag
agcctgatgagcatcagccggatgatgtcacagcaggtgacacagagcgaggaaaccatg
acgacgctggcaacctcgtctcaggcggtcgtggagaccaacgatgagtttaaggccatg
accggaaccatccagctggggagaaaactcatcactaagtacaaccgcagggagctcact
gacaaactgctcatcttcctcgcactcgcactcttcctcgccacggtcttctacatcctc
aagaagagattcttcttcttcctctag
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