Coregonus clupeaformis (lake whitefish): 121539474
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Entry
121539474 CDS
T08357
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121539474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121539474
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121539474
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_22
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_3
AAA_28
ATPase
AAA_14
AAA_25
NPHP3_N
RNA_helicase
TIP49
NACHT
AAA_33
IstB_IS21
NB-ARC
Mg_chelatase
AAA_7
ABC_tran
AAA_24
Parvo_NS1
SLFN-g3_helicase
Zeta_toxin
Viral_helicase1
TsaE
Motif
Other DBs
NCBI-GeneID:
121539474
NCBI-ProteinID:
XP_041703930
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All DBs
Position
25:26986695..27001772
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKRKKKSKGPDAASKLPLVTPHTHCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGNLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTLLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVTLDELILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggaggacatggacccgggggaggaaaaaaagacgacaaggat
aagaaaaagaaatatgaaccaccaatccccaccagggttgggaagaggaagaagaagagc
aagggacctgatgctgccagcaagctacctcttgtaactccccacacacactgcaggctg
aagctgctgaagcaggagaggatcaaagactacctgctgatggaggaggagtttatcagg
aaccaggaacagatgaagccccttgaggagaaacaggaggaggagaggtcaaaggtagat
gatctgagaggaacccccatgtcagtggggaacctggaggagatcatcgatgacaaccac
gccatcgtttctacgtctgtgggctctgagcactatgtcagcatcctctcctttgtagac
aaggacctgctggagccaggctgctccgtccttctcaaccacaaggtccatgccgtcatt
ggggtcctaatggatgacactgatcctctggtgacggtgatgaaggtggagaaggcccca
caggagacatacgctgacattggtggactggataaccagatccaggaaattaaggagtct
gtggagctccctctgacccatccagagtactatgaagagatgggcatcaaacctcctaaa
ggagtcattctgtatggcgcaccagggacagggaagaccctactggccaaggcagtggct
aaccagacgtcagcaactttcctgcgtgtggtgggctctgagctaatccagaagtacctg
ggggatgggcccaagctggtccgagagctgttcagggtggctgaggaacacgcgccctcc
atcgtcttcatcgatgagatcgacgccatcgggactaaaaggtatgactctaactcggga
ggggagcgggagatccagaggactttgctggagctgcttaaccagctggatggttttgac
tccagaggcgatgtcaaggtcattatggccaccaacaggatagagaccctggaccccgca
ctcatcagaccaggccgtattgaccgtaaaatagagttccccctgccggatgagaagacc
aagcgaaggatattccagatccacacaagcaggatgaccgtggcagacgatgtgaccctg
gatgaactgatcctggccaaggatgacctctccggagctgacatcaaggccatttgtaca
gaggcagggctgatggctctgagagagcgcaggatgaaggtgacgaacgaggactttaag
aagtcgaaggagaacgtgttgtacaagaaacaggaagggacaccagagggactatacctc
taa
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