Coregonus clupeaformis (lake whitefish): 121539508
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Entry
121539508 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121539508
00071 Fatty acid degradation
121539508
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121539508
09143 Cell growth and death
04216 Ferroptosis
121539508
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121539508
03320 PPAR signaling pathway
121539508
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121539508
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121539508
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121539508
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121539508
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121539508
Exosomal proteins of breast cancer cells
121539508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121539508
NCBI-ProteinID:
XP_041703997
LinkDB
All DBs
Position
35:39510284..39523558
Genome browser
AA seq
710 aa
AA seq
DB search
MGLQSELHSLLLLPLHLLVWLYSLLSFLPWYYLTGAGEKRTQATRVKARSTSGHSEGPYR
CVDRFQSLATEDFPGKDTLDKLFQQAVQRFGDSDCLGTREVLSEENEPQPSGKVFKKLIL
GEYRWLSYQQVDSVVNYMGSGLAALGQQPKSMVAIFCETRAEWMISAQACFRHNFPLVTF
YATLGEEAVVFGLNETGVTHLITSTELLETTLKGVLAQIPKLKHIISVDQRRVSTEGYPP
GLTIHSMASVQELGAQPDNLARPVVSPQPSDLAVVMYTSGSTGRPKGVMVVHSNITAGMT
GQCERIPGLGPKDTYIAYLPLAHVLEMTAEISCMAYGCPIGYSSPQTLSDQSTKIKRGSR
GDCSVLKPTLMAAVPEILDRINKNVMSKVGDMSYIQRTLFNLGYNYKLEQVKRGYDAPLC
NALLFSKVRRLLGGRVRLMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADKSTGRVGAPVICCEIRLRDWLEGGYTNQDKPHPRGEILIGGPNITMGYYRNESNNQDF
FVDEKGQRWFCTGDIGEIHPDGCLQIVDRKKDLVKLQAGEYVSLGKVEAALKNCSLIDNI
CAYANSEQNYVISVVVPNQKRLTELARQRGVEGSWEEVCTHPAMEKEVLKEIKEVATSIN
LQRFEIPVKVHLSPEPWTPETGLVTDAFKLKRKELKNHYLQHIERMYGRQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccaatcagagctccactccctgctcctcctccccctccacctcctggtgtgg
ctgtactccctcctttccttcctgccctggtactacctcaccggggctggggagaagaga
acgcaggccacacgggtcaaggctcgctccacctccggccactccgaggggccgtaccgc
tgtgtagaccgcttccagagcttggccacagaagacttccctgggaaagacacgctggac
aaactgttccaacaagccgtgcagcgctttggggactctgactgtctagggacaagagag
gtactgagtgaggagaatgagccccagcccagcggaaaggtctttaagaagctgattctg
ggagagtaccgctggctgtcctaccagcaggtagactctgtagtgaattacatgggcagt
gggttggcagcactgggccagcagcctaagagtatggttgccatcttctgtgagaccaga
gctgagtggatgatctctgctcaggcctgcttcagacacaacttcccattggtgacgttc
tatgcgacactgggagaggaggcggtggtgtttggactgaacgagacgggagtcacacac
ctcattaccagcacagaactactggagaccacactgaagggtgttctcgctcagatcccc
aagctgaaacacataatctctgtagaccagaggagggtcagtacagagggatacccacct
ggtctcaccatccacagcatggcatcagtacaggagctgggggcacagcctgacaacctg
gctaggccggtggtgagtcctcagccatcagacctggctgtagtgatgtacaccagtggt
tctacaggcagacccaaaggagtcatggtcgtccacagcaacatcactgctggaatgacc
ggacagtgtgaacgcatccctggcctgggtcctaaagacacctatatagcctacctccct
ctggcccatgtgttggaaatgacagcagaaatctcctgcatggcgtacggctgtcccatc
ggttactcctcccctcagacactctctgaccagtccactaagataaagaggggaagtaga
ggagactgctctgtgctgaaaccaactctgatggctgctgtaccggaaatcctggaccgc
atcaataagaacgtgatgagtaaggttggggacatgagttacattcagaggacgctgttc
aacctgggatacaactacaaactggagcaggtcaagaggggctacgatgctcctctctgc
aacgcgctgctgttcagtaaggtgaggaggctgctgggcggcagggtgaggctgatgttg
tctggaggggctcctctttcctccgccacacagaggtttatgaacatatgtttctgctgt
cctgtgggccaggggtacggactgactgaaacctgtggagctggcaccatcacagaggtg
gcagacaaaagtacaggtagagtcggagctcctgtcatctgctgtgagatccgactcagg
gactggctggagggaggctacaccaatcaggacaagcctcacccccgaggggagattctg
attggagggcctaacatcactatgggttactataggaacgagagtaacaaccaggacttc
tttgtggacgagaagggtcagaggtggttctgtacaggagacataggagagatccaccct
gacggatgtctacagatagtggaccgtaagaaggacctagtgaagctccaggctggggaa
tacgtctctctggggaaagtagaagctgctctgaagaactgctccctcatcgacaacatc
tgtgcttacgctaacagtgagcagaactatgtgatcagtgttgtggtacccaaccagaag
aggttgactgagctggccagacagaggggagtggaggggagctgggaggaggtgtgcacc
caccctgccatggagaaggaggtgctgaaagagatcaaggaggtggccacttcaattaac
ctccagaggtttgagatcccagtgaaggtccacctcagcccagagccctggacccctgag
acaggcctggtgactgatgccttcaagctgaagaggaaagagttaaagaaccactatctt
cagcacatagagaggatgtatgggagacagtaa
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