Coregonus clupeaformis (lake whitefish): 121539523
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Entry
121539523 CDS
T08357
Symbol
sstr1a
Name
(RefSeq) somatostatin receptor type 1
KO
K04217
somatostatin receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121539523 (sstr1a)
04081 Hormone signaling
121539523 (sstr1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121539523 (sstr1a)
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Peptide
Somatostatin
121539523 (sstr1a)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
T2SSM
Motif
Other DBs
NCBI-GeneID:
121539523
NCBI-ProteinID:
XP_041704017
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Position
25:complement(30756449..30759006)
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AA seq
368 aa
AA seq
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MLPNSSFGNLTLEDGFFLMNNSSGNETYSESHGSAILISFIYSVVCLVGLCGNSMVIYVI
FRYAKMKTATNIYILNLAIADELLMLSVPFLVTSSLLHHWPFGSLLCRLVLSVDAINMFT
SIYCLTVLSIDRYIAVVHPIKASRYRRPTIAKIVNFGVWMFSILVILPIIIFSTTVPNLD
GSVACNIQMPKPVNQWMAVFVIYAFLMGFLFPVIAICMCYILIIAKMRVVALKAGWQQRK
KSERKITLMVMMVVTVFVICWMPFHIVQLVNVFVEHHNATLMQLAVILGYANSCANPILY
GFLSDNFKRSFQRMLCLRWMDNATEEPIDYYATALKSRGYSVDEFQPDNMECDSTYRNGT
CTSRTTTL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctccccaacagctctttcgggaatctaaccctggaggacggttttttcctaatgaac
aactcgtctgggaacgaaacgtacagcgagtctcacggcagcgctatcctcatctccttc
atttactcggttgtctgtttggtcggactgtgtgggaactctatggttatctatgtcatt
ttcagatatgctaaaatgaaaactgcaacaaatatttacattctgaacttggccatagcg
gacgagttacttatgctgagtgtccccttcttggtgacatcttcactccttcatcactgg
cctttcggctcacttctctgccgccttgttctaagtgttgatgctattaatatgtttacg
agtatttactgcttaactgtacttagcatagaccgatatattgcggttgtgcaccccatt
aaagcctcccggtaccggagacccacaatagctaaaatagtcaactttggggtttggatg
ttttctatcctggtcattttgcccattattatattttccacgaccgttccaaacttggac
ggttcggttgcttgcaacattcagatgccaaagccagttaaccagtggatggctgtgttt
gtgatctatgcctttctcatgggctttctgttcccagtcattgcgatctgtatgtgttac
atcctcatcatcgccaagatgagagtggtggcactgaaggcaggctggcagcagcgtaag
aagtcggagagaaagatcactctgatggtgatgatggtggtgacggtgtttgtcatctgt
tggatgccctttcacattgtgcagctggtcaatgtctttgtggagcaccataacgcaaca
ctcatgcaactcgcagtgattttgggatacgcaaatagctgcgccaacccaatactgtac
ggatttttatcagacaatttcaaacgttcgttccaaagaatgttgtgcctgcgctggatg
gacaatgcaacagaggaacccatagattactatgccacggctctgaaaagtcgtggttac
agtgtggatgaatttcaaccggacaatatggaatgtgatagcacttatagaaatggaacc
tgcacttctaggacaacgacactgtag
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