Coregonus clupeaformis (lake whitefish): 121539526
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Entry
121539526 CDS
T08357
Symbol
arid4a
Name
(RefSeq) AT-rich interactive domain-containing protein 4A
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121539526 (arid4a)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121539526 (arid4a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
ARID
121539526 (arid4a)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
121539526 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Motif
Other DBs
NCBI-GeneID:
121539526
NCBI-ProteinID:
XP_041704021
LinkDB
All DBs
Position
25:30913463..30933969
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AA seq
1429 aa
AA seq
DB search
MKAANEPAYLTVGTEVSAKYRGAFCEAKIKTVKRMVKVKVMLKGDTTSQVVQDDQVKGPL
RVGSTVEVKSAEGICSEATINKLTDASWYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKGNRGGRRSSQAHADDDKESSSSEEDNEDRRRLNDDLMGKVA
SVQTGADWTSWYLALVISPSCNDDLTVKKDQCLVRSFADSKFHTVARKEIHEVNMDSISK
PEFSPRNGLDGAVHFLKTKVVPDSWKMDMSEILESSSSDEEDTEGKESDDEEEEEEEEKE
DANDEPEDEADPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCD
KIESGSVWKQIYIDLGIPVLNSAASYNVKTAYRKYLYGFEEYCRSACIVFRTIHHSEDPP
ASQSQTEHMAAQVPEVEECQGPTPPVETESAAAMEDKPAQEEAESGSESDKEGHKDISSP
KGRRLCTVTPVKAEVKEPAKLEKAEQRGVGETSGEETGGPGDGIRSDGGDTPGNRRSRRL
EESDKESEDEEEEEDDEDEDSERRVGERGEDEDSEDSVTGTKVKVKYGRGKTQKIYEANI
KKAENDDGGDVLYLVHYYGWNVRYDEWVKADRIIWPVDKGGTKKKQKKKVKNREEGEKED
DKQGKPGGLKPGRPLLRTTPASANRSVSKTPSSEGRSSSKSKSDVTALPNGEGTPRRRTR
RTSGMYDSDRDSNSNESGNSSEDSESEDSPEKKPSWAERTDPATARKQEEEEDRRVERGR
AEAAQAAAQVQPPSSPQEKEQQEDKLPERRELEKAEEQPQAPPMTPEPDRPKEEDPPTPK
SPRSKAARRSNVREPERNTTNNDTGSETPTKTITTTTTTPNYTETESSPCPRPLNRQDEP
MVVLHCLPAEHIPSIPDLPTMDSDTDSATEEETCREERGVAKRKATEQRTPDKKVRLDRR
EETTKMASPGRRPADSPGRRPADSPGRRPADSPGRRPADSPGRRPADSPARRPADSPARR
PADSPARRPADSPARRPADSPARRPADSPEWRLEAGGQKDEERLTPTKGKTEPEVKTEMP
ALTPEVQCQGLGEGGVAGGRPRSEQPGLGAEEEVMPQIGPEALVCHEVDLDDLDEKDKTS
AEDLLMMMSQGKVHAPPPSNASSHNPPPLSSGGAAPPRVFSPTSAPSPDESHSTKSESDV
TIEVDSVAGESQEGLGDNESANSNCFEASTSSSNSSMSLQERDTKDRGQKRLMDCNMSSS
AKKQKRNQKRPSTTSKIDKNGTGNSSDSEDLAVMDTSSKLTPVKHSMSKGSQKLVSPNSK
ELEKYKHKDKQSSFPSPRTYKWTFQLNELDSMTSAERISFLQDKLQDIRKYYMSLKSEVA
SIDRRRKRLKKKEREVSHTTASTSSGSSDTGMSPSSASPTQNTVAVECR
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcaaacgagcctgcctacctgaccgtgggaactgaggtcagcgccaaatac
agaggtgccttctgtgaggcaaaaatcaagactgttaaaaggatggtgaaggttaaggtg
atgctcaaaggagacaccacatcgcaagttgttcaagatgatcaagtgaaaggaccgtta
agggtgggctccacagtggaggtgaagagtgcagaggggatctgcagtgaggcaaccatc
aacaaactcacagatgccagttggtacacagtggtgtttgacgatggggatgagaagaca
ctccgcaggacgtcactgtgtctgaagggggaaagacattttgctgagagcgagacgttg
gaccaactgcccctaaccaacccggagcactttggcacccccgtcatcgggaagaaggga
aaccgcggaggaaggaggtcatctcaggctcatgcggacgatgacaaggagtcgtcctcc
agtgaagaggacaatgaggacaggaggaggctaaacgatgacctgatgggtaaagtggcc
agtgttcagactggggcagactggacatcctggtacctggccctggttatatcacccagc
tgcaatgatgacctgacagtcaagaaggaccaatgtttagtcagatcatttgcagactcc
aaatttcacactgtggcaagaaaggagatccatgaagtgaacatggacagcatctctaaa
cctgagttctcgccgaggaatgggttggatggggcagtgcatttcctcaagaccaaggtg
gtccctgacagttggaagatggacatgagtgagattttagagtcctccagcagtgacgag
gaggacacggaaggaaaggagagtgatgacgaggaggaggaggaggaggaggagaaggaa
gatgccaatgatgagcctgaggatgaggcggacccagaggagagggatcacttcctgcag
cagctgtataaattcatggaggatcgagggacgccaattaacaagcctcctgtgctcggc
tacaaggatctgaacctcttcaagctcttcaggctagtctaccaccaggggggctgtgac
aaaattgaaagtggatctgtgtggaaacaaatctacatagaccttggcattcccgtccta
aactctgctgcctcctacaatgtgaagactgcctacagaaagtacctgtatggctttgag
gagtactgtcgctcagcttgcatcgtcttcaggaccatccaccacagcgaggatccgcca
gcctcccagtcccagacagaacatatggctgcccaggtccctgaggtggaggagtgccag
ggcccaacaccacccgtcgaaactgagtctgctgcagccatggaggacaagcctgcccag
gaggaggcagagtcggggagcgagagcgacaaagagggccacaaagatatctcttctccc
aaggggaggagactgtgcactgtgaccccagtcaaagctgaggtgaaggagcctgcaaag
ctggagaaggcggagcagagaggtgtgggggagaccagcggagaggagactggaggtccg
ggagacggcatcaggtcagatggaggggacaccccggggaacagacgcagccgacgcctg
gaggagtccgataaagagtctgaggacgaagaggaggaggaggatgatgaggatgaggac
agcgagaggagagtcggagaacggggtgaggacgaggactctgaagactcggtgacaggg
acgaaggtgaaggtaaagtacggtcgagggaagacccagaagatctacgaggccaacatc
aagaaggccgagaacgacgatggaggagatgtcctctacctggtccattactacggttgg
aacgtcaggtatgatgagtgggtcaaagcagaccggatcatctggcctgtggacaagggc
ggaacaaaaaagaaacagaaaaagaaagtgaagaatagagaggaaggagagaaggaggac
gacaagcaggggaagccgggtggcttgaagccaggtcgccctcttcttagaaccactccc
gccagcgccaaccgcagcgtctccaagacccccagcagtgaggggcgctccagcagcaag
agcaaatctgatgtaacagccctgcccaacggagaggggacccctcgccgacgcacaaga
agaacctctgggatgtatgactcggacagggattccaactccaatgaatcggggaactcg
tccgaggacagtgagtcagaggattctcctgagaagaagccttcgtgggcggagaggacg
gaccccgccacggcccgtaagcaggaggaggaggaggaccggagggtggagagaggaaga
gcagaggcagcacaggccgcagcacaggtccagcctcccagcagccctcaggagaaggag
cagcaggaggacaagctccctgagaggagggagctggagaaggctgaggagcagccccag
gcgcccccaatgacccctgaacctgacagacccaaggaggaggaccctcctaccccgaaa
tcccccaggtctaaagcagcacgtagaagtaacgttcgcgagccagagaggaacaccacc
aacaacgacactggctctgaaacacccaccaaaaccatcaccaccaccaccaccactccc
aactacactgagaccgagtcgtctccctgcccgcgccccctgaacaggcaggatgagccc
atggtggtccttcactgtctccctgctgagcacattcccagcatccctgaccttcccacc
atggactcggacacagactcggccacagaggaggagacctgcagggaggagcgaggtgtg
gccaagcgtaaagctaccgagcagaggacgccggacaagaaggtgcgtctggataggagg
gaggagacgaccaagatggcgtcgccggggaggaggcccgctgactcgccggggaggagg
cccgctgactcgccggggaggaggcccgctgactcgccggggaggaggcccgctgactcg
ccggggaggaggcccgctgactcgccggccaggaggcccgctgactcgccggccaggagg
cccgctgactcgccggccaggaggcccgctgactcgccggccaggaggcccgctgactcg
ccggccaggaggcccgctgactcgccagagtggaggctggaggcagggggacagaaagac
gaggagcgcctgacgccaactaaggggaaaacggagcctgaggttaaaacagagatgcct
gccctcactccggaggtgcagtgtcaaggtctaggagagggaggtgtagcaggaggtcga
cccaggtcggagcagccaggcttgggggccgaggaggaggtgatgccccagatcggccct
gaggcgctggtctgccacgaggtggatctggacgacctggatgagaaggacaagacctca
gcagaagacctcctaatgatgatgagtcaggggaaggtccatgctccccctccgtccaat
gcctcctcccacaacccccctcctctatcatcggggggcgctgctcctccacgggtcttc
tcccccacctctgcccccagccctgatgagtcccacagcaccaagagtgagagcgacgtc
accatcgaggtggacagcgtagcaggggagtctcaggaggggcttggcgataacgagtcg
gccaactccaattgctttgaagctagcaccagctccagcaactccagcatgtcactacag
gagagggacaccaaggacagaggtcagaaaaggttgatggactgcaatatgagttcttct
gcaaagaagcagaagcgaaaccagaaacggccaagcacaacgtccaaaattgataagaac
ggaacagggaacagcagtgacagtgaggacctggctgtcatggacacctccagtaagctg
actccagtgaaacactccatgtctaaaggaagccagaagctggtctctcctaacagtaag
gagcttgagaagtataagcacaaagacaagcagtcctccttcccctcccctcgcacatac
aagtggaccttccagctcaatgaactggacagcatgacaagtgctgagaggatatccttc
ttacaagacaaactacaggatataaggaagtactacatgtcactcaagtctgaagtggcc
tccatagacaggaggaggaagaggttaaagaagaaagaaagagaagtgtcccacaccaca
gcgtcaacatcgtccggctcgtcagacactgggatgagcccctcttctgcctcgcccact
cagaacactgtggctgtcgagtgtaggtga
DBGET
integrated database retrieval system
