Coregonus clupeaformis (lake whitefish): 121539555
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Entry
121539555 CDS
T08357
Name
(RefSeq) putative Polycomb group protein ASXL2 isoform X1
KO
K11471
additional sex combs-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121539555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121539555
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121539555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
121539555
NCBI-ProteinID:
XP_041704069
LinkDB
All DBs
Position
25:complement(36540253..36567395)
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AA seq
1398 aa
AA seq
DB search
MRERQKKKKGRTWAEAAKTVLEKYPNTPMSHKEILQVIQRERLKEIRSGTSPLACLNAML
HTNSRGEEGMFYKVPGRMGVYTLKKDIGDVVKELSEEGSEEDDSDNLSDSQGSTENNNYT
NNQEGMRGQWRRRGPSKLPSDPSSPQPRCSSPSVPSSKLISPSQKHSKKALKQALKQQQQ
RNQRRQGGMPTTSSPRLLIKNVKDMADTIATKTESCPASGTRKMSQRSNRLSARQLKRTK
CAEIDVETPDSILVNTNLRALINKHTFSVLPTECQQRLLTLLPEVDQQACMDGLLKVTSS
ALNNEFFTSAAQSWKERLAEGEFTPELQLRMRQEIEKEKKVEHWKESFFESYYGENSGLS
LEESKELLESGLSLELSATKPQSSPPTQPSPAGQALQDPKVPENSCHTRFSERRLRSSSL
PINPTCKPIEPPSKPIEPSKPRPEPEPVQEEPVPVPPVVPPVLLPKNVQKTLEVEYPRHR
TRSRGLSLPIMAVEAPVVRRQDVVDSTSMVTPLGEKQKEEEEQELKEAQPETPQSPEVPQ
SPAQENHPEVCPQKKLRSSLLTDLPKPEPLGLDKHSGERREDVDVAPERGTSVSVSVTPV
STPVSTPVSTPVSTPVSTPVSTPVSTPVSTPISTTPSPEPLKRKSSSSEQEVELTPEKRA
RITSVVTSPATTITTAQRVPPLKIPVSRILSVPASPTQVSPRTPLPLSPGPSPGRTGART
LADIKAKAQLARAQRAAAAAAASSSSKGAVPGPGPGGGNVEQRTHRASAQTLHSRPSSST
HSSTQSQSITRLPVSSTTGQSTCQSPDAVITSAHSRLVQSSGSSVPFDLSLSQRSSNTGR
VSLTDDQQRGYSDSLMNPGSLMGPQHGNIQHTSYPPGPQSTSSYTSSVCGVKSQYVSGVS
GGSMAARASHFIPANNPLVTSLLQGKEVPLEQILPKPLANAEVQMAQAKPSHDDKGTIKS
HSTAGTAGGENQSQYLHAGGVEDYSRSEQQGSIGQSTSTIPGTRAGMLAELQRHPRETPN
KDIQEQILQTLMQRATQQHQNQPYGVSGRAQPAQFGACNLGHQKECVDRLRFSAGFPGRK
RMSRPAMSGHYLLNVSTYGRGSESSKRSHPLTTANTSLTPLTNLKREHIEGEGEESVENK
SHSHSNPAGVKMEEQGFSITKMDEALGFQHCSRVMSESPSVGGCLPEQEDNSSAGTDRDS
GTSARAKETNPFTQSQSQHRRHPELCNTKQGGHSEPYRLSVSPHVGTMDPSHPSTHQRPS
AFQIQRPPIDNQESMVGSCYGGTISMSVPHHSAAASGTASSASPSVSGSGGDSGSGTGSV
MSFSVTVTTIPAGHPLDHSSQGEGSPEQGFMEGSGIENVQSKCYCRLKAMIMCKGCGAFC
HDDCIGPSKLCVSCLVVR
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagacagaagaaaaagaaggggaggacatgggcagaggctgctaaaacggta
ttagaaaagtaccccaacacacccatgagccacaaagagatcttacaggtgatccagagg
gagagactgaaagagattagaagtggtacttctccgctggcctgtctcaatgctatgctc
cacaccaactctcgcggtgaagaaggaatgttctacaaagtacctggacgaatgggggtc
tacacactgaagaaggacattggggacgtggtgaaggagctgtctgaggaggggtccgag
gaggacgatagtgataatctgtctgattcccagggaagcacagagaacaacaactacact
aacaaccaggagggcatgaggggacagtggaggaggagagggccctccaagctgccgtct
gatccgtcgtctcctcagccacgttgttcatctccctctgtccccagtagcaagctcatc
tctccctcacagaaacacagcaagaaggccctcaaacaggccctgaagcagcagcagcag
aggaaccagcggagacaggggggcatgcccaccacctccagcccgagactgctcatcaag
aacgtaaaggacatggctgacaccattgccactaagaccgaatcctgtcctgcctctggt
accaggaagatgtctcagaggtccaatcgactcagtgcacggcaactgaagcgtaccaag
tgtgcagagatagacgttgagacaccagactctatcctggttaacaccaacctgcgtgcc
ctgatcaacaaacacaccttctctgtcctgcccacagagtgccaacagaggctactcaca
ctactgcctgaggtcgaccaacaggcctgtatggatggtctgttgaaggtcaccagttct
gccttgaacaatgagtttttcacatcagcagctcagtcctggaaggaacgactggcagaa
ggtgagttcactcctgagttgcagcttagaatgcgtcaggagattgagaaggagaagaag
gtggagcattggaaggaaagcttctttgagagctactatggtgaaaactctggactcagc
ttagaggaatccaaagagttgcttgagtctggtcttagtctggagctctcagccaccaaa
ccccagtcgtctcctccaacacagccaagtcctgctggccaagcactgcaagatcccaag
gtccctgagaacagctgccatactcgtttttcagagaggaggctccgatcatcatcactg
cctataaaccctacatgtaaaccaatagaacctccatctaaacccatagagccttccaag
ccaagaccggaaccagagcctgttcaggaagaaccagtaccagtcccacccgttgtccca
ccagttctattaccgaaaaatgtacagaagacactggaggttgagtaccccagacacagg
actcgtagcagaggtttatccctgcctataatggcagtggaggcacctgttgtgaggaga
caagatgtggtggactcaacctcaatggttactccacttggggagaagcagaaggaggaa
gaggaacaggagttgaaagaggcccagccggagaccccccagtcccctgaggtcccacag
tcccctgcccaggagaatcatccagaggtctgcccccagaagaagctcagatcgtcactg
ctgaccgaccttccaaagccagagcctctgggcttggacaagcacagtggggagaggagg
gaagatgtagatgttgcaccagagagaggcacctcagtctcagtgtcagtcacccccgta
tccacccccgtatccacccccgtatccacccccgtatccacccccgtatccacccctgta
tccactcctgtatccacccctgtatctacccccatatccaccaccccatccccggagccg
ttgaaaaggaagtcctcatccagtgaacaggaagtagagctgactccagagaagagggcc
cgcatcacatccgtggtaacctctccagcaaccaccataacaacagcacagagagtgcct
ccgcttaagattcctgtgtcacgaatcctatcagtccctgcatctccaacccaggtgtcc
cccagaacccctctccccctcagccctggccccagccccggacgcactggtgctcgcact
ctggctgacatcaaggctaaagctcagctagcccgggcccagcgtgcagcagcagctgct
gcagccagctcctcctctaaaggtgcagtaccaggcccgggaccaggaggaggcaatgta
gagcagagaacccatagagcttcagcccagaccctccactccagaccctcctcctccacc
cacagctccacccagtctcagtcaatcaccaggctgccagtaagtagcaccactggtcaa
tctacctgtcaatcacctgatgcagtcatcacatcagcccactcccgtttggtccaatca
tcaggctcctctgtgccctttgaccttagcctgtctcaaagaagctccaacaccggtaga
gtgtctctcactgatgaccaacagagaggctactccgatagtcttatgaacccaggttct
ctgatgggccctcaacatgggaacattcaacatacgtcatacccaccaggtccccagtca
acctctagctacacctcatctgtgtgtggtgtgaagagccagtatgtatctggtgtatct
ggaggctccatggcagccagggctagccacttcatcccagccaacaaccctctggtcacc
tctctcctccaggggaaagaggttcctctggaacagatcctccccaagccgctggccaac
gcagaggtccagatggcccaggccaaaccctcccatgatgacaaagggacgataaagtcc
cacagcactgctgggacagccggtggtgagaatcagagccaatacctacacgctggtggt
gtagaggactacagtagatctgaacagcaaggatccataggccagtccacttccaccata
cctggaacaagagcaggtatgttggcagagctccagcgccatccaagggaaacacctaac
aaagacatccaggaacagatcctccagactctgatgcagagggccacccagcagcaccag
aaccagccatatggggtctcaggcagggctcagcctgcccagttcggagcttgtaatctg
gggcaccagaaggagtgtgtggaccgtcttcggttctcagcagggttccctggacggaag
aggatgtccaggcctgccatgtcagggcactacctcctcaatgtctccacgtacggacga
ggctcagagagcagtaaacgctcccacccattgaccaccgctaacacctcactgacccca
ctgaccaatctaaagagagagcacattgagggggaaggggaggagtcagtggagaataag
tctcattctcattctaaccctgctggagtgaagatggaagagcagggcttctcaatcaca
aaaatggatgaagctctgggctttcaacactgctccagagtaatgtctgagtctccatca
gtggggggctgtctaccggagcaggaggacaacagttcagccggtacagatagagacagt
ggcacttctgcaagagccaaagaaaccaaccctttcacccaatcacaatcacagcacagg
aggcacccggaactctgcaatactaaacagggtggtcattccgagccatatcgtttatct
gtatctccccatgtggggaccatggaccccagtcaccccagtactcaccagcgtccgtct
gcctttcaaatccagagacctccaatcgataatcaggaatccatggtgggttcctgctac
ggtggcaccatcagcatgtctgtacctcaccacagtgctgctgcttcaggcaccgcttcc
agcgcctccccctctgtgtcaggtagtggtggggacagtggcagtggcaccggcagtgtc
atgtctttctcagtgaccgtcaccaccatacctgccggtcacccattggaccacagcagc
cagggggaggggtctccagagcaggggtttatggagggatctggtatagagaacgttcag
tctaaatgctactgccgactcaaagctatgataatgtgtaaagggtgtggggccttctgc
catgacgattgcattggcccttcgaaactctgtgtctcgtgtctagtggtacgataa
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