Coregonus clupeaformis (lake whitefish): 121539562
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Entry
121539562 CDS
T08357
Name
(RefSeq) paired box protein Pax-9 isoform X1
KO
K09382
paired box protein 1/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121539562
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121539562
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
121539562
NCBI-ProteinID:
XP_041704080
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All DBs
Position
25:36798447..36808574
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AA seq
353 aa
AA seq
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MEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLPSV
SSISRILRNKIGNLSQQSQYESSKQSSHPPPQPTLPYNHIYSYPTPIGASGTKVPTPPGM
PTLPGHMAMHRIWPSSHSVTDILGIRSITEQQISDSSSFPSAKLEEWSVINRTHFPPSAS
SPLVNGVLDKPPHSIEPEAKYTQMQSGLPTVNSYVTAPSIPAYPPPTPVSPYMGYSATTS
AYVTGPTWQPHSGSARSHHSCDNVAAPLAFKGLTAHHRDAIHPNAHAITASAL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggagccagcctttggagaggtgaaccagctcggcggtgtttttgtcaacggcagaccg
ctacccaacgcaatccggctgcggattgtagagctcgcccagctgggcatcaggccttgc
gacatcagcagacagctccgggtctcccacggctgcgtcagcaagatactggcccggtac
aacgagaccggctctatactcccgggagcgatcgggggcagcaaaccacgggtcaccacg
cctacagtagtcaagcacatacggacatacaagcagagggacccgggtatcttcgcttgg
gagatccgggacaggctactggctgacggagtttgtgacaagttcaatctaccatctgtg
agctccatcagtaggatcctccgcaacaagattgggaatctgtcccagcagagtcagtat
gagtccagcaagcagtcgtctcacccaccaccacaaccaacgctaccatacaaccacata
tactcctatccgacccccatcggagcctctgggaccaaagtaccaactcccccgggcatg
cctaccctacccggacacatggctatgcacaggatatggccctcctcccactcggtaaca
gatattctggggattcggtcgataacagagcaacaaattagtgacagttcgtcctttccc
agtgccaaactagaagaatggagcgttataaacaggacacattttccgccgtcagcaagc
tctccactagtcaatggcgtgctggataaaccaccgcattctatagaacctgaagcaaaa
tacacacagatgcagagtggcttgcccacagtgaacagttatgtcacagcgcccagcatc
ccagcctacccccctcccaccccagtgtcgccctacatggggtacagcgccaccacgtcg
gcctatgtgaccggtcccacatggcagccgcacagtggcagtgctcgctctcaccacagc
tgtgacaacgtcgccgctccgctggccttcaagggtttgacagcccaccaccgtgacgcc
atccaccccaatgcccacgccatcaccgcctcagcactgtag
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