Coregonus clupeaformis (lake whitefish): 121539574
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Entry
121539574 CDS
T08357
Symbol
cdan1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121539574 (cdan1)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121539574 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
SPATA2_PUB-like
Motif
Other DBs
NCBI-GeneID:
121539574
NCBI-ProteinID:
XP_041704102
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All DBs
Position
11:complement(38136667..38159111)
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AA seq
1397 aa
AA seq
DB search
MAALLESLLQKEVEAIKAVEWLKHDEDSDSLAWCKPLKIERQEFVPFLLNFLREQSSSAL
THGPATPAKTPSRPRVSQPSQQGPGFSSERRGGCRSTGHGTSPHSASRVQLFSSTPSLSP
GAEWDTTHPPSGSHCLSGGSLSGVSALSSPSFSSARSPAPASTPRHTPSERRSDQRASLG
DFMLSPPELQNQPHHHSLSLGVQQQPRGRRRSAGMGMGGQGRQGGGRCVFQFEEVVPGRS
EGGGRKGRGLGANKMGDPAVSPPKSQTPTLVQLNLTNLEDFPPMGMSHASPLLQTKPSRR
INPTPVSAERPHSRPKTCFTSTPFSTRPSSPPPVPEAIEGCITGALKLNMGSPPLSLQEE
RELLKRVKCKRAQQVCSPLPPSLDPCTPTKSGLRPGSGSKITPDTQGSCPDPTKVTLTSE
LDLLADLYCTCISENLVPNVFLEMFFVLQLLTSRTPAITEEEDKDLSMVKSDVLERGYLS
KVHNCVYFSVRVLENQFELVSHLDKDTLRLLAENERVTCFSPSLRNRLNLAQDTSTAKVL
PSVDTFIHSVPFQPATDNRSNFSSDKAFHTFKKQRDIFYEVLREWEDFHKEPRWEFEAAL
GSRVRGMVSQLNSAGNHSHFARLFLKQLVQMCKGPRALGSPGDAPDADLLGMLGADSLGR
LKRLEERLIQPQGILGPCPPPSFPGHQEFFRDFLKTASCCQLNQHLKDSLCQQLLQLDEV
SILAPVVSSTEGEGDMEQQDEKQRFSSVLLLARLLAKFLGYISFLPYQTSERTSREIQEA
TAALRSKSTSVLDVCAVLRSCVRRRRTILTVPWLVEFLSMLDFTGPFLLCYRTVLGLLLS
LYRRMVLSRGGEVCYLNQLLMVAVLGWLFQIPVIPEELFFSTDFAVDVELEESQTNVQGL
DCLPLVDQQLLYTCCPFLGEFRKLLAAFVAGSSARGGGLIRKITPTSAELRGTPTTTRSQ
HKLQVDLEQAFFHNQPPSLRRTVEFVAERVGSNCVKHMKATLVCELVRGGERLLREGLIS
PGANVLKLNDSICAQLCDGGQEALERATRFCSEKGPEAIRVLLPDETSLAVLTTSENITK
RLATEKACSWLSSNITALVKREWKTKFDRVMKSLPSPEASGVEGCGSSFGLGVVAKAGAA
AVTQEQSRTPKRDVGKEEALTSCPPDCHHSAPRPSDVLVEIKEMLSIAVGPRSEKEVLTG
LQLKALLDSVGDTLSCRKFSFPVPEQMLIRCTVLLACKLVSGELPMVSSQEECSRTVSPG
RTVSPGGPGLPDSPVQRVGCSIKALLEQLVLLWGRDCCSSAPLHLLFTEMTLRAVLVVSD
SQWDNFLFLVRQLVERGILGEEEVVSHWRKLSQLPWPTEFIEKIQQQSSSTTSLPLPELQ
NHMDVLHVSQQPVEGAN
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcttttggaatcgttgctacagaaggaagtggaggctatcaaggccgtagaa
tggctaaaacacgacgaggacagtgacagcttggcatggtgtaaaccactgaagattgaa
agacaggagtttgttcctttcctgttgaacttcctgcgggagcagagcagctccgccctc
acccatggccctgccacacccgccaagacccccagccgccccagggtctcccagccctct
cagcaggggccaggcttctccagtgaacgcagggggggctgcagatcgaccggacatggg
accagtcctcatagcgccagccgtgtccagctattctcctccactccctccctgtcccct
ggggctgagtgggatactacccaccccccatccggctcccactgcctgagtggcggtagc
ctaagtggggtcagtgccctcagtagtccttccttcagctcagccaggagccctgctcca
gcgtccacccccaggcacactccctcagagcgccgctccgaccagagagccagtttgggg
gatttcatgctgtcacctccagagctccagaaccaaccccaccaccacagtctcagcctg
ggggtccagcagcagccgcgtggccgcaggaggagtgccgggatgggaatgggagggcag
gggaggcagggtggggggcgttgtgtgttccagtttgaagaggtggtgccaggaagatct
gagggtggtgggaggaagggaaggggattaggggctaataaaatgggtgacccagccgtg
tcacctccaaagtctcagacgccaacgctggtccagctcaacttaaccaacctggaagac
ttcccacctatggggatgtcacatgcctcaccactactgcagacaaaaccatctcggagg
atcaacccaaccccagtcagtgcagagcggcctcactccagaccgaagacctgtttcact
tccaccccgttcagcaccaggccctccagccctcccccagtcccagaggccatcgaaggg
tgcatcactggggccctgaaactgaacatgggcagcccccctctcagtctgcaggaggag
agagaactgctaaagagagtgaagtgtaaacgagcccagcaggtgtgctcccctctaccc
ccctctctggacccctgtacccctaccaaatcagggctccggccgggatcaggctccaaa
attacccctgacacccaggggtcatgtcctgaccccactaaagtcaccttgacctctgaa
ctggaccttctggctgacctctactgcacctgcatctctgaaaacctagttcccaacgtg
ttcctggagatgttctttgtactgcagctgctgacatctagaacaccagccatcacagag
gaagaggacaaggatctaagtatggtgaagtcagatgtcctggaaagaggctacctcagc
aaggtgcataactgtgtctacttctctgtcagggtgttggagaatcagtttgagttggta
tctcacctggataaagacaccctgcgtctgttggctgagaacgagagggtgacctgcttc
tccccatccctgagaaacagactgaacctggcacaggacaccagcacagccaaggtcttg
ccctctgttgacaccttcatccactctgtcccattccagcctgccactgacaaccgctcc
aacttcagcagtgacaaagccttccacaccttcaagaagcagagggatattttctacgag
gtgctgcgagagtgggaggacttccacaaggaacctagatgggagtttgaagctgcacta
ggcagtagggtcagaggaatggtgagtcaactgaactccgctggaaaccactcccatttc
gccagactcttcctcaagcagctggtgcagatgtgtaaaggtccccgtgctctgggctcc
ccgggtgacgcccccgacgcggacctgctaggcatgctgggagcagacagcctggggcgt
ttaaagcgtctggaggagcgtctgatccagccccagggcattctgggaccctgtcctcca
ccttccttcccaggacaccaggagttcttcagggacttcttaaagactgcaagctgctgc
cagctgaaccagcacctgaaggacagtctgtgtcagcagctcctccagctagacgaggtg
tccatcctggctcctgtggtctcaagtacagagggagagggagacatggaacaacaggat
gagaagcagcgtttctcctctgtcctactgttggctcgtctcttagctaagttcctgggt
tatatctccttcctgccataccagacctctgagagaacctccagggagatacaggaggct
actgccgccctccgcagcaagagtacctctgtgctggatgtgtgtgcggtgctgcgtagc
tgtgttcgtaggagacggaccatcctgactgtgccctggctggtggagttcctttccatg
ctggacttcaccggacccttcctcctctgctacaggaccgttctgggactgctgctcagc
ctatacaggaggatggtgctgtccagaggaggagaggtatgttacctgaatcagcttctc
atggtggctgtactgggctggctattccagatcccagtgatcccggaggagcttttcttc
agtactgatttcgctgtagacgttgagctggaggagagccagaccaacgtccagggactt
gactgtctccccctggtggaccaacagctcctctacacctgctgtcctttcctgggtgag
ttccgtaagctcctcgctgcctttgtggccggtagctctgccaggggtggaggcctcatc
cgtaagatcacccctacctctgctgagctgagaggaacccccaccaccaccaggtcacag
cacaaactgcaggtggatttggagcaagccttcttccataaccagcctccatctctcaga
cgaaccgtggagtttgtagctgagagggtgggatccaactgtgtcaaacacatgaaggcc
acgttggtgtgtgagctggtccgtggtggggagagattgctaagggaggggctgatctca
ccaggggccaacgttctgaaactcaatgactccatctgtgctcagctctgtgacggaggc
caggaggctctggagagagctaccaggttttgtagtgagaagggtccagaagccatcagg
gttcttcttcctgacgagacgtctcttgctgttctcactacgtctgagaacatcaccaag
cgcctggccactgagaaggcctgcagctggctctcctccaacatcacagctctggtcaag
cgagagtggaaaacaaagtttgaccgtgtgatgaagtctcttcccagcccagaggctagt
ggtgtggagggttgtggttctagttttggtcttggggtcgtggctaaagctggagctgca
gcagtcacccaggagcagtcacgtaccccaaaacgggacgtgggcaaggaggaggctttg
acgtcctgccctccagactgccaccacagtgcaccacgaccatctgatgtcctggtagag
attaaggagatgttgagtattgcagtgggccccaggtctgaaaaggaagtgctgactggt
ctacagctgaaagctctactggacagtgtaggagacacactgagctgcagaaagttctca
ttcccagtgcctgaacagatgctgatacgttgcaccgtcctactagcctgtaaactagtt
tcaggggagctgcccatggtgtcctcacaggaggaatgtagtaggacagtgtctcctggt
aggacagtgtctcctggtggtccaggactgccagactccccagtccaaagagtaggctgt
tcaatcaaagccctgctggagcagttggttctcctatgggggagagactgttgttcatca
gcccccctccacctgctcttcacagaaatgacactcagagctgtcctcgtggtcagtgac
tcacagtgggacaacttcctgttcctggtcagacagctggtagagagggggattctggga
gaggaagaagtggtctctcattggaggaagctgtcacagttaccttggccaacggaattc
atagagaagatccagcagcagtcctcttccaccacatcccttcctctacctgagcttcag
aaccacatggacgtgttgcatgtctcacaacaacctgtagagggagccaactga
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