KEGG   Coregonus clupeaformis (lake whitefish): 121539599
Entry
121539599         CDS       T08357                                 
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4
  KO
K24720  tubby-related protein 4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121539599 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 Other domain-containing proteins
  Tubby family proteins
   121539599 (tulp4b)
SSDB
Motif
Pfam: Beta-prop_WDR35_TULP_N Tub ANAPC4_WD40 WD40_CDC20-Fz Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_HPS5 Beta-prop_ELP1_1st WD40_Prp19 SOCS_box WDR55 Ribosomal_60s
Other DBs
NCBI-GeneID: 121539599
NCBI-ProteinID: XP_041704155
LinkDB
Position
25:36224132..36235328
AA seq 1735 aa
MSRNYEPGHSVGMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCQRRYYEEGWLAT
GNCRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHLLLHESDGIVGMSWNCPCFLVQDST
ESDTDSDDNNPPQVRILKPLLTVSFISGDISLMNNYDDLAPTVIRSGLKDVEVQWCSQGD
LLAVAGMERHGLPGVPSDSIMRNALVKFYNIQGEHIYTLETPAQCPITTICWGHRDSRLF
LACGPVLYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSILCSYVTTAFIPTIKP
PIPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRIS
KLRPEFIIIDPKTDSKADEVCVNAMISYMTDSCNCSDSSDIELSDEWVGKKSPKLSRGNR
SPKLSRRNMESRKSPKMSRASQEGPRSPRLPTKKPPIRSPSLTRREMSMDGISEHNYLAQ
VTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLDFMSLPVF
NPNVFSEDEDDLPVMGPSGVTSDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQN
IQLDVLTNPTAMASAAAAAAAAAASASIAGPDHSQNAVAAQYSGTLGRYSNPGQIQQQHQ
QMQRQHQQMQQQMKLQITLPPPPTGYPTISLQQFQVLQQIPHPSAELGPERGEQGHSQSH
TLGRPSLPRSRPPSFIDVDSLRSRPPSFIEADTSRSRPPSFIDIDTIRTRPPSFIDADTG
TLRSRPPSFLDVDSSRSRPPSFIDTDTLRSRPPSFLDAETSLEIQMRKVNPPPPYPGTVV
SAATATTSTTPQTLITNCDNPSILVTADPCLKKDEFSLHPVGLQYQMGYERITTFDSSGN
VEEVCRPRRRLIRNQNTYAAQGMGGSATLKVTSSSDSKKVLLPYSSATLSRLSVPRYSIP
SGDPPPYPDPANQVNINTTTLPPPQRMDSSHMIHGTLRPDRRDVESRLKVSQMVDASRTL
PTKSKINSAALALSYQQRVPTALYTCTQCSSNSSSTSVSVSGGGSSSSGIVGGTVVRQDF
PPGKVAHHSTIIVHSKSTSPQASQSSYNLLSPIDNSRDRTVYVNSAFTEDETLSQQCRHL
TLGEVSLTLKRPPPYQWDPNTSEEFWIPPEQTILAPPPPPTHKPPPPLIFSNAQHLDMTR
LPFVLSTKPPSSPSTVTFPSGYQISLSPFPPGVGQGGSPLQSMQSLPPPSPPNEVVAPVP
QFAQQDPNLVLPPGYPPNHANLACCPLPPMYPGATSCAGLQQHPVSLHPWNPYSLPMQDP
SGSATLPSKSHQVLEKPVLSPPPPTAPPPPPPSLPPPPPPTELPKPKSPTEELAESASSF
QEPSSPNQSPVPDRQGSDRFSKKSRKRLDSRAEEANMTTVSEGKSKKEGRALSDFNSLIS
SPRLGCREKKKPKGQREQLNKTKKLNRTSTTSEFQDSSESEPELFISGDELMNQSQSSKK
GWKSKRSLRMASELEEIKCRKANEREDRGLGSQGFIYVMANKQPLWNEATQVYQLDFGGR
VTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq 5208 nt   +upstreamnt  +downstreamnt
atgtccaggaactatgagcctggtcactcagtagggatgttggctgctgtggaacatggt
cccatcctctgcagcgactccaacatcctctgcctctcctggaagggccgggtccccaag
agcgagaaggacaagcctgtgtgccagcggcgctactatgaggagggctggttggccaca
gggaactgtagaggggtggtgggcgtgacgttcacatccagccactgcaggagagacagg
aacacccctcagagaatcaacttcaacctgcgaggacacaacagtgaggttgtgttggtt
cgttggaatgagccctttcagaagttggccacgtgtgacatggagggaggcatcttcgtc
tggattcagtatgagggacggtggtctgtagagttagtgaatgaccgtggtgcccaggtg
agtgatttcacgtggtcccatgatggcactcaggccttgatcgcctacagggatgggttt
gtcctggtggggtcggtcagcggacagagacactggtcctcagagatcaacctggagagc
cagatcacctgtggcatctggacacctgacgaccaacaggtgttgtttggtacagccgac
ggtcaggtgatagtgatggactgtcatggtcgcatgctggcccatctcctgctacacgag
tcagatggcatcgtcggcatgtcctggaactgcccctgcttcctagtgcaggacagcaca
gaaagcgacactgactctgatgacaataacccacctcaagtgcgtatcctgaagcccctt
ctgacagttagcttcatatcaggagacatcagtttgatgaacaactatgatgacctcgct
cctaccgtcatccgctcaggactcaaagatgtggaggtccagtggtgttctcagggggac
ctcctggcggtagctggaatggagagacatgggctccctggagtcccctctgactctatc
atgaggaacgccctggtcaaattctacaacatccaaggagaacatatctacacgttagaa
acacctgcccagtgtcccatcaccaccatctgctggggccacagagactctcgtctgttc
ctggcgtgtggcccggtgctgtacgtggtgcgtgtggagcaccgggtggccagcctgcag
ctgctgtgccaacagggcatcgccagcgccctgcgggaggagagggacgtgggcaaactc
aacatgccctccatactctgctcctacgtcacaaccgccttcatacccaccatcaagcct
cctattcctgatcccaacaacatccgggactttgtcagctaccccactgctggcaacgag
aggctgcactgcaccatgaagcgagcggaggacaaccccgaggcagggggaccctgttac
accctctacctggaacacctaggggggctggtgcccatcctcaaaggcagacgcatcagc
aagctacggccagagttcatcatcatagaccctaaaacagacagcaaagcagatgaggtg
tgtgtgaatgctatgatctcctacatgactgacagctgtaactgttccgactccagcgac
attgagttgagtgatgagtgggtcgggaagaagtcacctaaactatccagaggaaacaga
tcacccaagctttccagaaggaacatggaatctagaaaatctcccaaaatgtcccgggct
agtcaggaaggcccacgatcaccacggttaccaacaaagaagcctccaattcgatctccc
agtctgacgcgtcgagagatgtccatggatggaatctctgagcataattatcttgctcaa
gtcacgtccaatatatgggggacaaagttcaaaatcgttggacttgcttctttcctacct
gctaatcttggtgcagttatctataagaccagtttgctccatctacaaccaaggcagatg
acaatctaccttccggaggtgcggaaaatatcacttgacttcatgagcctgcctgtcttt
aacccaaatgtcttcagtgaggatgaggatgacttgccagtgatgggaccatctggagtg
acaagtgacaaccctccctgtacggtcaacatccccattgcacccatccacagccctgcc
caagccatgtcccccactcagagcattggtctggtccagtccctgctggccaatcagaac
atccagctggatgtcttgaccaatcccacggctatggcttcagcagcagcggcggcggcc
gctgcagctgcatcagcctctattgcagggcctgatcacagtcagaatgcagtagcagca
cagtacagtgggactctgggaaggtactccaacccaggacagatacaacagcaacaccaa
cagatgcagaggcagcaccaacaaatgcagcagcaaatgaagctgcagatcaccttgccc
cctccgcctactggctatcccaccatctctctgcagcagttccaggtactgcaacagata
ccccaccccagtgcagagttgggaccagaaagaggagagcaggggcatagtcagagccat
actctgggcaggccaagtctaccgcggtcaaggcctccatcattcattgacgtagacagc
ttacggtctaggcctccttccttcatcgaagcggacacatcaagatctagaccgccgtca
ttcatcgacatagacacaatacggactagacctccttctttcattgatgcagatacaggt
acattgcggtctagacccccgtctttcctcgatgtggactcctcccgatccagacctcct
tcattcatagacacagacacactacggtccagacctccttccttcctcgatgcagagact
tcccttgagatccagatgagaaaggtgaaccctccaccaccctacccaggcaccgtagtg
tctgcagccaccgccacaacctccaccactcctcagaccctcatcaccaactgtgacaac
cctagcatactggtcacagcagacccgtgtctgaagaaagacgagttctcactccaccca
gttggtctccagtatcagatgggatacgagaggatcacaacctttgacagcagtgggaat
gtagaggaggtgtgtcgccctcgcagaagactcatacgcaaccagaacacctacgctgct
caaggcatgggaggttcggccacacttaaagtcacctcatcgtctgacagtaagaaagtc
ctgcttccttacagctcagcaactctaagccgcctttcggtgccacgatactccataccc
agcggagacccgcccccctacccagatccagccaatcaggttaacattaacacgacgaca
cttcctcctccccaacgcatggacagtagtcacatgattcacggcaccttgcgacctgac
cggcgagacgtggaatcccgcctgaaggtgtcccagatggttgacgcttcaaggactcta
ccaaccaagtctaagatcaacagtgctgccctagcgctctcttaccagcagagggtgccc
acggctctgtatacctgcactcagtgcagcagcaacagcagcagcaccagtgtcagtgtt
agcggtggtggtagtagcagcagtggcatcgtaggaggcactgtagtgcgacaggatttc
ccaccaggaaaagttgcacatcacagcaccatcattgttcactctaaaagcacttcccct
caagcttctcagtcgtcttacaatctgctgagtcctattgataacagcagggataggact
gtgtatgtgaactctgcctttaccgaagacgagacattaagtcagcagtgtcgtcacttg
acacttggggaggttagtttgactctgaaacgtcccccaccataccagtgggaccccaac
acctcagaggagttctggatacccccagaacagactatcttagctccccctccaccacca
acgcacaaaccaccacccccgctcatcttcagcaatgctcagcatctggacatgacacgg
ctgcctttcgtactctcaacaaaacctcccagcagcccaagtactgttactttcccatcg
ggctaccagatctctctgtcacctttccctccaggggtaggtcagggtggatccccactc
cagtccatgcagagccttccaccacccagccctcccaacgaagtagttgccccagtcccc
cagtttgcccagcaggaccccaacctggtcttgccacctggataccctcccaaccatgcc
aacctagcttgctgcccactgcccccaatgtacccaggggccacatcctgtgccgggctt
cagcagcaccctgttagcctgcacccctggaacccatatagcctacccatgcaggacccg
tcaggctctgccaccctccccagcaagtctcatcaggtgttagagaagccagtcctctcc
ccacctcctcctactgctcctcctcccccacctccttcacttcctcctcctcctccacca
accgagctgccgaaacccaaaagccctacagaggagctggcagaatctgccagtagcttc
caggagccgtcttctccaaaccaaagccctgttccagaccgacaggggtccgacaggttc
agcaagaaaagtcgtaaacgtctggacagccgagccgaggaggcaaacatgaccaccgtc
tcagagggaaaatccaaaaaggaagggcgcgccctctccgacttcaactccctaatctcc
agccccaggcttggctgcagggagaagaagaaacccaaaggccagagggagcagctgaac
aaaaccaagaagctcaacaggaccagtaccaccagcgagttccaggacagttcggagagc
gagcctgagctcttcatcagcggagacgaactgatgaaccagagccagagctccaagaag
ggttggaagagtaagaggagcctgaggatggccagtgaactggaggagattaagtgcagg
aaggccaatgagagagaggaccgcgggctgggcagccagggattcatctacgtcatggcc
aataagcagccactctggaacgaggccacacaggtctaccagttggacttcggaggacgg
gtcactcaggagtctgctaagaactttcagatcgagctggacgggagacaggtgatgcag
tttggcagaatcgatgggaacgcatatatcctggatttccagtatcctttctcagcagtg
caggcctttgctgttgccttagccaatgttactcaaaggctgaagtaa

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