Coregonus clupeaformis (lake whitefish): 121539599
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Entry
121539599 CDS
T08357
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121539599 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
Tubby family proteins
121539599 (tulp4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_ELP1_1st
WD40_Prp19
SOCS_box
WDR55
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
121539599
NCBI-ProteinID:
XP_041704155
LinkDB
All DBs
Position
25:36224132..36235328
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AA seq
1735 aa
AA seq
DB search
MSRNYEPGHSVGMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCQRRYYEEGWLAT
GNCRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHLLLHESDGIVGMSWNCPCFLVQDST
ESDTDSDDNNPPQVRILKPLLTVSFISGDISLMNNYDDLAPTVIRSGLKDVEVQWCSQGD
LLAVAGMERHGLPGVPSDSIMRNALVKFYNIQGEHIYTLETPAQCPITTICWGHRDSRLF
LACGPVLYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSILCSYVTTAFIPTIKP
PIPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRIS
KLRPEFIIIDPKTDSKADEVCVNAMISYMTDSCNCSDSSDIELSDEWVGKKSPKLSRGNR
SPKLSRRNMESRKSPKMSRASQEGPRSPRLPTKKPPIRSPSLTRREMSMDGISEHNYLAQ
VTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLDFMSLPVF
NPNVFSEDEDDLPVMGPSGVTSDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQN
IQLDVLTNPTAMASAAAAAAAAAASASIAGPDHSQNAVAAQYSGTLGRYSNPGQIQQQHQ
QMQRQHQQMQQQMKLQITLPPPPTGYPTISLQQFQVLQQIPHPSAELGPERGEQGHSQSH
TLGRPSLPRSRPPSFIDVDSLRSRPPSFIEADTSRSRPPSFIDIDTIRTRPPSFIDADTG
TLRSRPPSFLDVDSSRSRPPSFIDTDTLRSRPPSFLDAETSLEIQMRKVNPPPPYPGTVV
SAATATTSTTPQTLITNCDNPSILVTADPCLKKDEFSLHPVGLQYQMGYERITTFDSSGN
VEEVCRPRRRLIRNQNTYAAQGMGGSATLKVTSSSDSKKVLLPYSSATLSRLSVPRYSIP
SGDPPPYPDPANQVNINTTTLPPPQRMDSSHMIHGTLRPDRRDVESRLKVSQMVDASRTL
PTKSKINSAALALSYQQRVPTALYTCTQCSSNSSSTSVSVSGGGSSSSGIVGGTVVRQDF
PPGKVAHHSTIIVHSKSTSPQASQSSYNLLSPIDNSRDRTVYVNSAFTEDETLSQQCRHL
TLGEVSLTLKRPPPYQWDPNTSEEFWIPPEQTILAPPPPPTHKPPPPLIFSNAQHLDMTR
LPFVLSTKPPSSPSTVTFPSGYQISLSPFPPGVGQGGSPLQSMQSLPPPSPPNEVVAPVP
QFAQQDPNLVLPPGYPPNHANLACCPLPPMYPGATSCAGLQQHPVSLHPWNPYSLPMQDP
SGSATLPSKSHQVLEKPVLSPPPPTAPPPPPPSLPPPPPPTELPKPKSPTEELAESASSF
QEPSSPNQSPVPDRQGSDRFSKKSRKRLDSRAEEANMTTVSEGKSKKEGRALSDFNSLIS
SPRLGCREKKKPKGQREQLNKTKKLNRTSTTSEFQDSSESEPELFISGDELMNQSQSSKK
GWKSKRSLRMASELEEIKCRKANEREDRGLGSQGFIYVMANKQPLWNEATQVYQLDFGGR
VTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactatgagcctggtcactcagtagggatgttggctgctgtggaacatggt
cccatcctctgcagcgactccaacatcctctgcctctcctggaagggccgggtccccaag
agcgagaaggacaagcctgtgtgccagcggcgctactatgaggagggctggttggccaca
gggaactgtagaggggtggtgggcgtgacgttcacatccagccactgcaggagagacagg
aacacccctcagagaatcaacttcaacctgcgaggacacaacagtgaggttgtgttggtt
cgttggaatgagccctttcagaagttggccacgtgtgacatggagggaggcatcttcgtc
tggattcagtatgagggacggtggtctgtagagttagtgaatgaccgtggtgcccaggtg
agtgatttcacgtggtcccatgatggcactcaggccttgatcgcctacagggatgggttt
gtcctggtggggtcggtcagcggacagagacactggtcctcagagatcaacctggagagc
cagatcacctgtggcatctggacacctgacgaccaacaggtgttgtttggtacagccgac
ggtcaggtgatagtgatggactgtcatggtcgcatgctggcccatctcctgctacacgag
tcagatggcatcgtcggcatgtcctggaactgcccctgcttcctagtgcaggacagcaca
gaaagcgacactgactctgatgacaataacccacctcaagtgcgtatcctgaagcccctt
ctgacagttagcttcatatcaggagacatcagtttgatgaacaactatgatgacctcgct
cctaccgtcatccgctcaggactcaaagatgtggaggtccagtggtgttctcagggggac
ctcctggcggtagctggaatggagagacatgggctccctggagtcccctctgactctatc
atgaggaacgccctggtcaaattctacaacatccaaggagaacatatctacacgttagaa
acacctgcccagtgtcccatcaccaccatctgctggggccacagagactctcgtctgttc
ctggcgtgtggcccggtgctgtacgtggtgcgtgtggagcaccgggtggccagcctgcag
ctgctgtgccaacagggcatcgccagcgccctgcgggaggagagggacgtgggcaaactc
aacatgccctccatactctgctcctacgtcacaaccgccttcatacccaccatcaagcct
cctattcctgatcccaacaacatccgggactttgtcagctaccccactgctggcaacgag
aggctgcactgcaccatgaagcgagcggaggacaaccccgaggcagggggaccctgttac
accctctacctggaacacctaggggggctggtgcccatcctcaaaggcagacgcatcagc
aagctacggccagagttcatcatcatagaccctaaaacagacagcaaagcagatgaggtg
tgtgtgaatgctatgatctcctacatgactgacagctgtaactgttccgactccagcgac
attgagttgagtgatgagtgggtcgggaagaagtcacctaaactatccagaggaaacaga
tcacccaagctttccagaaggaacatggaatctagaaaatctcccaaaatgtcccgggct
agtcaggaaggcccacgatcaccacggttaccaacaaagaagcctccaattcgatctccc
agtctgacgcgtcgagagatgtccatggatggaatctctgagcataattatcttgctcaa
gtcacgtccaatatatgggggacaaagttcaaaatcgttggacttgcttctttcctacct
gctaatcttggtgcagttatctataagaccagtttgctccatctacaaccaaggcagatg
acaatctaccttccggaggtgcggaaaatatcacttgacttcatgagcctgcctgtcttt
aacccaaatgtcttcagtgaggatgaggatgacttgccagtgatgggaccatctggagtg
acaagtgacaaccctccctgtacggtcaacatccccattgcacccatccacagccctgcc
caagccatgtcccccactcagagcattggtctggtccagtccctgctggccaatcagaac
atccagctggatgtcttgaccaatcccacggctatggcttcagcagcagcggcggcggcc
gctgcagctgcatcagcctctattgcagggcctgatcacagtcagaatgcagtagcagca
cagtacagtgggactctgggaaggtactccaacccaggacagatacaacagcaacaccaa
cagatgcagaggcagcaccaacaaatgcagcagcaaatgaagctgcagatcaccttgccc
cctccgcctactggctatcccaccatctctctgcagcagttccaggtactgcaacagata
ccccaccccagtgcagagttgggaccagaaagaggagagcaggggcatagtcagagccat
actctgggcaggccaagtctaccgcggtcaaggcctccatcattcattgacgtagacagc
ttacggtctaggcctccttccttcatcgaagcggacacatcaagatctagaccgccgtca
ttcatcgacatagacacaatacggactagacctccttctttcattgatgcagatacaggt
acattgcggtctagacccccgtctttcctcgatgtggactcctcccgatccagacctcct
tcattcatagacacagacacactacggtccagacctccttccttcctcgatgcagagact
tcccttgagatccagatgagaaaggtgaaccctccaccaccctacccaggcaccgtagtg
tctgcagccaccgccacaacctccaccactcctcagaccctcatcaccaactgtgacaac
cctagcatactggtcacagcagacccgtgtctgaagaaagacgagttctcactccaccca
gttggtctccagtatcagatgggatacgagaggatcacaacctttgacagcagtgggaat
gtagaggaggtgtgtcgccctcgcagaagactcatacgcaaccagaacacctacgctgct
caaggcatgggaggttcggccacacttaaagtcacctcatcgtctgacagtaagaaagtc
ctgcttccttacagctcagcaactctaagccgcctttcggtgccacgatactccataccc
agcggagacccgcccccctacccagatccagccaatcaggttaacattaacacgacgaca
cttcctcctccccaacgcatggacagtagtcacatgattcacggcaccttgcgacctgac
cggcgagacgtggaatcccgcctgaaggtgtcccagatggttgacgcttcaaggactcta
ccaaccaagtctaagatcaacagtgctgccctagcgctctcttaccagcagagggtgccc
acggctctgtatacctgcactcagtgcagcagcaacagcagcagcaccagtgtcagtgtt
agcggtggtggtagtagcagcagtggcatcgtaggaggcactgtagtgcgacaggatttc
ccaccaggaaaagttgcacatcacagcaccatcattgttcactctaaaagcacttcccct
caagcttctcagtcgtcttacaatctgctgagtcctattgataacagcagggataggact
gtgtatgtgaactctgcctttaccgaagacgagacattaagtcagcagtgtcgtcacttg
acacttggggaggttagtttgactctgaaacgtcccccaccataccagtgggaccccaac
acctcagaggagttctggatacccccagaacagactatcttagctccccctccaccacca
acgcacaaaccaccacccccgctcatcttcagcaatgctcagcatctggacatgacacgg
ctgcctttcgtactctcaacaaaacctcccagcagcccaagtactgttactttcccatcg
ggctaccagatctctctgtcacctttccctccaggggtaggtcagggtggatccccactc
cagtccatgcagagccttccaccacccagccctcccaacgaagtagttgccccagtcccc
cagtttgcccagcaggaccccaacctggtcttgccacctggataccctcccaaccatgcc
aacctagcttgctgcccactgcccccaatgtacccaggggccacatcctgtgccgggctt
cagcagcaccctgttagcctgcacccctggaacccatatagcctacccatgcaggacccg
tcaggctctgccaccctccccagcaagtctcatcaggtgttagagaagccagtcctctcc
ccacctcctcctactgctcctcctcccccacctccttcacttcctcctcctcctccacca
accgagctgccgaaacccaaaagccctacagaggagctggcagaatctgccagtagcttc
caggagccgtcttctccaaaccaaagccctgttccagaccgacaggggtccgacaggttc
agcaagaaaagtcgtaaacgtctggacagccgagccgaggaggcaaacatgaccaccgtc
tcagagggaaaatccaaaaaggaagggcgcgccctctccgacttcaactccctaatctcc
agccccaggcttggctgcagggagaagaagaaacccaaaggccagagggagcagctgaac
aaaaccaagaagctcaacaggaccagtaccaccagcgagttccaggacagttcggagagc
gagcctgagctcttcatcagcggagacgaactgatgaaccagagccagagctccaagaag
ggttggaagagtaagaggagcctgaggatggccagtgaactggaggagattaagtgcagg
aaggccaatgagagagaggaccgcgggctgggcagccagggattcatctacgtcatggcc
aataagcagccactctggaacgaggccacacaggtctaccagttggacttcggaggacgg
gtcactcaggagtctgctaagaactttcagatcgagctggacgggagacaggtgatgcag
tttggcagaatcgatgggaacgcatatatcctggatttccagtatcctttctcagcagtg
caggcctttgctgttgccttagccaatgttactcaaaggctgaagtaa
DBGET
integrated database retrieval system