Coregonus clupeaformis (lake whitefish): 121539620
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Entry
121539620 CDS
T08357
Name
(RefSeq) human immunodeficiency virus type I enhancer-binding protein 2 homolog
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121539620
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121539620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_16
zf-met
TFIIIA_zf-C2H2
zf-H2C2_5
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
121539620
NCBI-ProteinID:
XP_041704192
LinkDB
All DBs
Position
25:complement(35400232..35415403)
Genome browser
AA seq
1929 aa
AA seq
DB search
MTLSLHILLHLHNRHYCLLDINPDEEGDIGIVMESLETTAEVKGSKEGLEKTVTQRKWAA
PEPMTAQTKITPTADSEGEGRHLCPQPEEDQSRTTCGSTERSDSGKLRLLEGKSLRQLQD
QPSSHPHYNVLTSYPPQERQTVPFARQKTADHLVSALPLSHGSCAGPSLQRSSPSLPTSL
QHCSQSGIEELSKDVCSKMEQKQQQRPGKYVCDYCGRACAKPSVLKKHIRSHTGERPYPC
VPCGFSFKTKSNLYKHRKSHAHSVKAGTVPISELGSYNANMEDQGSLEGEGELYSDTEQS
SDTDEDDSSLLDSVSVEEPDSTTAVKVLNLIAQKQGVTSTLSEERSSSLPEINGAQAPAV
SQVSRAIQSSAIKQRLALRLSEKRSSDTDTSLSLPSQGSKSSTDSGYFSRSESAEHQTSG
PPNTNAKSYQEIMFGKCYKPNPKQAITVVTCTTDLISDRKSSERGVSRVFTQEKESMIES
IRINTRSFTREGIKEAQLELSDSGQLVRSNSMPTSSAACLDMPQGLRGSHSFDERASPGG
IRRLRRQAAFEHSAHDGNTELPDHYGNISDISNLGVETECATRKRRKEKCVREEEDVGGQ
YHTDYGHSEEMRDNDSKQVSQGALTTTTSVKGHAQSVHTQNRLDMEMWEDTTERRTLGNV
ISVIQHTNSLSRSHSDESYNYQRQEKPSSMKVVEQTETREMRKRTEIFAHQLSDSRLLDQ
SYQMTPKLVRQSNIQVPEIRVTVEPDSPEKEKAAEVKQVKAKEPDRHVEEFQWPQRSETL
SQFPPEKLPPKKKRLRLADLEHSSGESSFGSTCTSLSRSPSQDSNLSYCSTFSFDREERE
RELIPKPASPAARQDEFGKALEFLSVPGSGHSLSVLNQRQQHEMRRSSSEQAACNSQRRE
LPEVRSVSFDYGSLSPMAKVRHAELGASYSEPRRSNLVRQASLNVDPEFTHPVLPLNILP
QYFRNALSFSATALLSQSLPMFAPQPPHSGLLVPVRIQTHVPSYGSITYTTVSQVVYDPY
ENSLTSHFAHLSTNLDASKALLGHPRGLLTNPAQVQVLDMSPAKLKTGIPLSLTSRTIST
TNCGSSGGSNKRMLSPASSLDLLMEVKQQKRVKEEKMYGEIVEELGAVELGNCNVTEESK
YSLKTEFKSDTNQGASLSGLPSISSLSVPSSLHSQDEPASGSFSSPQQQGSECPHSHMDS
SPTETSLHPPSLLSLNDFKESGMDSKAHMDMLVQLVKGQGILISDGENTKLISQFPSLRT
TTGVSWCYLNYTKPNSTHYTSPMSSVYTMWCVSSHNPNPPNLNTSATLALLCSKQKTNTW
VYTMAAMYQPGTGKLVSSKQRFELLQSKPELKELDVISYGRKVKDASCRVKAAKEDWKDM
EVSSKQTAVLTPTQIKIFEGGFKSNEDYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRT
HTDVRPYVCRVCNFAFKTKGNLTKHMKSKAHMKKCLELGVSVIVDDTETHESDDVQQHSK
TGVLSSAKHQFSDADDSDGMDEEIDDIDEDDDDDYDGGSTPKIRSRSTSPQPCGIASLSV
TQSVSSALHGCTLSTFRSLPSCLTNSIVPGIDVHPHPSISGRRTGPDRRTVLASSLDKEQ
SERERLVDEDCSLAMLSPDQGCLFFDHTCLLSPGWESPLREPSPSRLCYPSPRRDLSPRG
RSSPRWDTSQLRPSSPNLTPIQHLSPVCMERPLSTGGVDLAGRREPSARGRQRVVLRAVS
PRRGGSQQRGSGDKTRQQAKAELVHKGGAIEMDLDQRRSMPPSLPGPSSSSCTHQNLLSH
LPLHSQQQARTLLPMVPIGGIQVLRTLPSCSSDRTHLSALSPQKTEQHQDSTKEGSVCVA
GPGAEDSVAQQQEKERERERPSPYQTPWDSEEEKDPVSVLTVRDPKQEEGLQTCTKAIAS
LRITSEEHL
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgacactttctctccatatattactacatttacataacagacattattgtctgttggat
atcaaccctgacgaggaaggtgacattggaatcgtcatggagtcactagaaactactgca
gaggtgaaaggctctaaagagggtctggaaaagacagttacacagagaaagtgggcagca
ccagagcctatgactgcccaaactaaaataacccctacggctgattctgagggggagggg
aggcacttatgcccacaacctgaggaggaccagagtagaaccacatgtggttcaacagaa
aggtctgactcagggaaactaagactattagaagggaaatcactacgccaattacaggat
caaccctccagtcatcctcattacaatgtattaacctcgtatccaccacaggagagacag
accgttccctttgctagacagaaaacggcagatcacttggtttctgcgctgccactatcc
catggaagctgtgcagggccctctcttcagaggagctcccccagtttacctacgtctctc
caacactgttcccagtcagggatagaggagctatccaaggacgtgtgtagtaagatggag
cagaaacagcagcagaggcctgggaagtatgtttgtgattattgtgggagggcatgtgcc
aaacccagcgtacttaaaaagcatatccgctcacatactggggagcgaccctacccctgc
gttccctgcggcttctctttcaaaaccaagagcaatttatacaaacacagaaaatctcat
gctcactctgtcaaagctgggacagtgccaatttcagaactgggttcttacaatgccaac
atggaggaccagggatctttagaaggagaaggagagttatactctgatactgagcagagc
tctgacacggatgaggacgattcatcgctcttggactctgtatcagtcgaggaaccagat
agcaccactgctgtaaaagtactgaatctcattgcccagaaacagggagttacatcaaca
ttatctgaggagcgttcatccagtctcccagagatcaatggtgctcaagctccagctgtt
tctcaggtcagccgtgcaattcaatctagcgccatcaagcagagactggcactccggctc
tcagagaaaaggagcagtgacactgacacatctctctccctgcctagccagggaagcaaa
agcagcacagactcaggctacttctcacgctctgagagcgcagaacaccaaaccagtggt
cctcccaacacaaatgcaaagtcctatcaagagattatgtttgggaagtgttacaaaccg
aacccgaaacaggccataactgttgtgacttgcactacagacttaataagtgatcgtaag
tcttcggagcgaggtgtttcccgtgtattcacacaagaaaaggaatcaatgattgaatcg
attagaataaacacacgttcatttacaagggaaggaattaaggaggctcaactagagctc
tctgattctggacagctggtgcggagcaactcgatgcccacgtcctcggctgcgtgtctg
gacatgccacaaggcctgcgaggcagccactcctttgatgagagggcgtcccctggaggt
attaggagacttaggagacaggctgcctttgaacactctgcacatgatggaaacacagaa
cttcctgaccactatggaaacatctctgatatttccaaccttggagtagagacggaatgt
gcgacgaggaaacgacggaaggaaaaatgtgttagggaggaggaagatgtaggaggccag
tatcacacagactatggccactctgaagagatgagggacaatgattcaaagcaagtctct
caaggtgctctaaccactactacttcagtgaaaggacatgcccaaagcgtgcatacacag
aatagactggacatggaaatgtgggaagacaccacagagaggagaactttaggtaatgtc
atctctgtgattcaacacacaaactccctaagcaggtctcactctgacgagtcttacaac
taccagagacaggaaaagccttcctcaatgaaagtggtggagcaaaccgaaactcgtgag
atgcgtaaaaggactgagatctttgcacaccagttgagtgacagtagattgttagatcaa
tcatatcaaatgacacctaagctagtccgtcagtccaacatacaggtcccagagatcagg
gtgactgtagaacctgacagtccagagaaagagaaagcagctgaggtaaaacaggtgaag
gcgaaggagcccgatagacatgtagaggagttccaatggcctcaaagaagtgaaactctg
tctcaattccctccagaaaaactccctccaaagaagaagagactgcgcttagctgacttg
gagcactcctctggtgagtctagctttggatcgacctgtacgagcctctcccgaagcccc
agtcaggacagcaacctatcctactgctccaccttctcgtttgaccgagaagagagagag
cgagagctgatccccaagccagcttccccggctgctagacaggatgagtttggaaaagcg
ttggagttcttatctgtgccaggaagcggccactccctctctgtcctgaaccagcgtcaa
caacatgaaatgagacgctcctcttcagaacaggcagcgtgcaactctcagcgtagagag
ctcccagaggttcgcagtgtatcgtttgactacggcagtctctctccaatggccaaagtt
agacatgcggaactcggcgccagttactcagaacccagacggagtaacttggtaagacag
gcgtccttgaatgttgaccctgaatttacacatccagtccttccgctaaatattcttcct
cagtacttcagaaatgccctgtcgttctcagccactgctctgctctctcagtctctgcca
atgtttgcccctcagccaccacactccggtctcctagttcctgttagaatacagactcac
gtgccgtcttacggtagcattacgtacaccactgtgtcacaggttgtatatgatccatat
gaaaactctctcacttctcactttgcacatttatccacaaatttagatgcatctaaagca
ttattaggacacccccgaggactgttgaccaacccagcccaggttcaagttctagatatg
tcaccagctaagctcaagacaggcatccctctctccctgacctccaggactatctccacc
accaactgtggatccagtggtggatccaacaagcgcatgctatcgccagccagcagcttg
gacctgttaatggaggtaaaacagcagaaacgcgtcaaagaagagaaaatgtacggtgag
atagtggaggagttgggtgctgtagagttagggaattgtaatgtgaccgaagagagcaag
tacagtttaaagacagagtttaaaagtgacaccaaccagggagcatcactgtcaggcctt
ccttctatatcctctttgtctgtgccatcctcacttcattctcaagacgagccagcaagt
ggaagcttcagctcacctcagcaacaagggtcagaatgtcctcattcccatatggatagc
tccccaaccgaaacaagcctacatccaccctctctgctttctctaaatgatttcaaagag
tctggcatggacagcaaggcacatatggacatgctggtgcagttagtcaaaggtcagggc
atcctcatctctgacggtgaaaacaccaaactgatatctcagtttccaagtcttcgcaca
acgacaggtgtgagttggtgctatctgaactacaccaagccaaacagcactcactacacc
tctcctatgtcctctgtgtacactatgtggtgcgtcagttcccataaccccaaccctcct
aacctcaacaccagtgcaaccctggctctgctctgctccaaacagaagactaacacatgg
gtgtacaccatggctgccatgtaccaacctgggactgggaaactggtctcctccaagcag
aggtttgagctgctacagagcaaaccggagctcaaagagctggatgtgatctcctatgga
aggaaagtgaaggatgccagctgcagggtaaaagcagcgaaggaggactggaaagacatg
gaggtctcctcgaaacaaacagcagtgctaacaccaacccagatcaaaatctttgaagga
gggttcaagtccaatgaggactatgtgtacgtgaggggcagaggccgaggaaagtatatt
tgtgaggagtgtggcatccgctgtaagaaacctagtatgctaaagaaacatatacgcacc
cacactgacgtcagaccctacgtttgcagggtctgcaacttcgctttcaaaacaaaagga
aacctgaccaagcatatgaagtcaaaggctcacatgaagaagtgtcttgagcttggggtg
tcagtcatagtggatgatacagagacacatgaatctgatgacgtccaacaacactcgaag
accggggtcttgagctcagccaaacaccagttctcagatgcagacgactccgatggcatg
gatgaagagatagatgacatcgacgaagatgacgatgatgactacgacggtggctccact
ccaaagatccgctctcggagcaccagccctcagccctgtggcatagcctctctgtcggtc
acccagagtgtgtcgtcagctctccatggctgtaccctcagtaccttccgttctctcccc
agctgcctcaccaactccatcgtgcctggcatcgatgtccatccccatccctccatctca
ggcaggaggacagggccagaccggaggactgtcttggcctccagcctggacaaggagcag
agtgagagagagaggcttgtggatgaggactgtagcctggccatgctgtctcctgaccag
ggttgtctgttcttcgaccacacctgtctgctgtcccctggctgggagtcccctctgagg
gaaccgtccccctcccggctctgctacccatcaccccgtagagacctctccccccggggt
cgctcctcacctcgatgggacacctcccagctgaggcccagctcccccaacctcaccccc
atccagcacctctccccggtctgcatggagaggcccctgtccacaggcggagtggacctg
gctgggaggagggagccatcggcccggggcagacagagggtggtgctgagggctgtgtct
ccacgtagagggggctcacaacagagagggtctggcgataaaaccaggcagcaagccaag
gctgaactggtccacaagggaggagccattgaaatggatttggatcagaggagaagcatg
ccccccagcctgcctggtccctccagctccagttgtacccatcagaacctcctcagccac
cttcccctacactcccagcagcaggctcgaactcttctccccatggtccctatcgggggg
atccaggtactgcgcactttgccctcctgcagctctgaccggacccatctgtcagccctg
tcccctcagaagactgagcaacaccaggacagcactaaggagggatctgtctgcgtagcg
ggcccaggtgcagaggactcagtagcccagcagcaggagaaggaacgggaaagggagagg
ccgtccccctaccagacaccctgggactctgaggaggagaaagaccctgtctctgtcctc
acggttagggaccctaagcaggaagagggtcttcagacctgcaccaaggccatcgcctcc
ctcaggatcacttctgaggagcatctatag
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